RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RRN3Q9NYV6 651 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 CRLS1Q9UJA2 301 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 DIAPH2O60879 1101 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 HMOX2P30519 316 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PCBP1Q15365 356 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 DDIASQ8IXT1 998 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 MS4A14Q96JA4 679 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 IRX2Q9BZI1 471 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PORCNQ9H237 461 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 C20orf96Q9NUD7 363 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 THG1LQ9NWX6 298 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TIMM13Q9Y5L4 95 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 EML1O00423 815 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 FDFT1P37268 417 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 PPP2R2AP63151 447 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM110CQ1W6H9 321 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 BTNL9Q6UXG8 535 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCDC60Q8IWA6 550 aaPredicted RBP18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM172AQ8WUF8 416 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 UBIAD1Q9Y5Z9 338 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCDC195A0A1B0GUA6 201 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 PRAMEF19Q5SWL8 479 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 ANKRD23Q86SG2 305 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 CARNMT1Q8N4J0 409 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 DACT3Q96B18 629 aaPredicted RBP18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 MRPL40Q9NQ50 206 aaKnown RBP18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 KDM4CQ9H3R0 1056 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 XAB2Q9HCS7 855 aaKnown RBP18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 ARMC6Q6NXE6 501 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 RIN2Q8WYP3 895 aaPredicted RBP18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 ELMO2Q96JJ3 720 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 SPATA17Q96L03 361 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 LRRC1Q9BTT6 524 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 UBXN6Q9BZV1 441 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 CLCA2Q9UQC9 943 aa18.43■□□□□ 0.54
CDC42EP3-201ENST00000295324 PLA2G6O60733 806 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 EIF4BP23588 611 aaKnown RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCZ1BP86790 482 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCZ1P86791 482 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZRANB3Q5FWF4 1079 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 COPS5Q92905 334 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 VPS28Q9UK41 221 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 PPFIA2O75334 1257 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 RHOCP08134 193 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 KCNA1Q09470 495 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 MAP4K3Q8IVH8 894 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 RMDN2Q96LZ7 410 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 TMEM134Q9H6X4 195 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 MROH7Q68CQ1 1323 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 CNTNAP2Q9UHC6 1331 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRIM51Q9BSJ1 452 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 MSRAQ9UJ68 235 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 PLA2G4CQ9UP65 541 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 CDH16O75309 829 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 PMPCBO75439 489 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 KITP10721 976 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 E4F1Q66K89 784 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 PLPPR4Q7Z2D5 763 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 ELOVL4Q9GZR5 314 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 UXTQ9UBK9 157 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZNF185O15231 689 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 JAMLQ86YT9 394 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 SMARCD1Q96GM5 515 aa18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP3-201ENST00000295324 A0A087X0T9 212 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 C2orf81A6NN90 581 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM228BP0C875 321 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 GGCXP38435 758 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 LACTBL1A8MY62 500 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 LZTS3O60299 673 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 LUC7L3O95232 432 aaKnown RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CKBP12277 381 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 FLT3LGP49771 235 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 NDST1P52848 882 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM71DQ8N9W8 422 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 MYCBPQ99417 103 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 AAR2Q9Y312 384 aaKnown RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CDY2AQ9Y6F7 541 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 TMEM150BA6NC51 233 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 SERPIND1P05546 499 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 MRPS6P82932 125 aaKnown RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 TPCN2Q8NHX9 752 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 CHORDC1Q9UHD1 332 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 MRC1P22897 1456 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 SYNCRIPO60506 623 aaKnown RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 RTN3O95197 1032 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 ARHGDIAP52565 204 aa18.41■□□□□ 0.54
CDC42EP3-201ENST00000295324 FBXW4P57775 412 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms