RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DPH5Q9H2P9 285 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 CNOT10Q9H9A5 744 aaKnown RBP17.73■□□□□ 0.43
CPSF4-201ENST00000292476 AVENQ9NQS1 362 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-201ENST00000292476 TMEM39AQ9NV64 488 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 SLC12A6Q9UHW9 1150 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 POLIQ9UNA4 740 aa17.73■□□□□ 0.43
CPSF4-201ENST00000292476 PIRO00625 290 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 CILPO75339 1184 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 LRPAP1P30533 357 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 FLT3P36888 993 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 MAGEA10P43363 369 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF211Q13398 564 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 DSC3Q14574 896 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 MESDQ14696 234 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 MAIP1Q8WWC4 291 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 KRT35Q92764 455 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 ZNF653Q96CK0 615 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 KLK14Q9P0G3 267 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 MTRF1LQ9UGC7 380 aaKnown RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 COLQQ9Y215 455 aaPredicted RBP17.72■□□□□ 0.43
CPSF4-201ENST00000292476 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
CPSF4-201ENST00000292476 FAM107AO95990 144 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 THP07101 528 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 ITGB8P26012 769 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 TAF6P49848 677 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 RWDD2BP57060 319 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 PPP2R2AP63151 447 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 NAA35Q5VZE5 725 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 DPH6Q7L8W6 267 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 UNC93AQ86WB7 457 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 PHF13Q86YI8 300 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-201ENST00000292476 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-201ENST00000292476 MAGOHBQ96A72 148 aaKnown RBP17.71■□□□□ 0.43
CPSF4-201ENST00000292476 TLCD1Q96CP7 247 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 TMEM109Q9BVC6 243 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 NT5C1AQ9BXI3 368 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 GDAP2Q9NXN4 497 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 FAM169AQ9Y6X4 670 aa17.71■□□□□ 0.43
CPSF4-201ENST00000292476 TRIM66O15016 1216 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 SPOPO43791 374 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 VDRP11473 427 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 SELPP16109 830 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 GUCY1A3Q02108 690 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.42
CPSF4-201ENST00000292476 SCARA3Q6AZY7 606 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 ZDHHC24Q6UX98 284 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 C18orf25Q96B23 403 aaPredicted RBP17.71■□□□□ 0.42
CPSF4-201ENST00000292476 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.42
CPSF4-201ENST00000292476 ADAM2Q99965 735 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 LHX5Q9H2C1 402 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 SMYD3Q9H7B4 428 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 MRPL47Q9HD33 250 aaKnown RBP17.71■□□□□ 0.42
CPSF4-201ENST00000292476 GRHL1Q9NZI5 618 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 SNX9Q9Y5X1 595 aa17.71■□□□□ 0.42
CPSF4-201ENST00000292476 KPNA7A9QM74 516 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 PARNO95453 639 aaKnown RBP17.7■□□□□ 0.42
CPSF4-201ENST00000292476 EOMESO95936 686 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 CALB1P05937 261 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 CD19P15391 556 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
CPSF4-201ENST00000292476 MAN1A1P33908 653 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 SLC1A1P43005 524 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 PMS2P54278 862 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 RAD23BP54727 409 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 NOMO3P69849 1222 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 KRT71Q3SY84 523 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 ZNF394Q53GI3 561 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 SYDE1Q6ZW31 735 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-201ENST00000292476 MYCBPAPQ8TBZ2 947 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 CENPTQ96BT3 561 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 PGM2Q96G03 612 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 LBHD1Q9BQE6 289 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-201ENST00000292476 PPP1R12CQ9BZL4 782 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 LRRC19Q9H756 370 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 RSAD1Q9HA92 442 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
CPSF4-201ENST00000292476 SCINQ9Y6U3 715 aa17.7■□□□□ 0.42
CPSF4-201ENST00000292476 KIAA0355O15063 1070 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 RAG1P15918 1043 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 CDH5P33151 784 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-201ENST00000292476 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-201ENST00000292476 CDH8P55286 799 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 IFFO1Q0D2I5 559 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 BYSLQ13895 437 aaKnown RBP17.69■□□□□ 0.42
CPSF4-201ENST00000292476 DENND2CQ68D51 928 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 CCDC137Q6PK04 289 aaKnown RBP17.69■□□□□ 0.42
CPSF4-201ENST00000292476 LRRC8DQ7L1W4 858 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 TADA2BQ86TJ2 420 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 NLRP14Q86W24 1093 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 OR2W6PQ8NHA6 318 aa17.69■□□□□ 0.42
CPSF4-201ENST00000292476 ZNF473Q8WTR7 871 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms