RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RSAD2Q8WXG1 361 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 NXPE3Q969Y0 559 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 LRRC3BQ96PB8 259 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 TWNKQ96RR1 684 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PLA2G2FQ9BZM2 168 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 RAB20Q9NX57 234 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 GDE1Q9NZC3 331 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 IGSF9Q9P2J2 1179 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 RWDD2AQ9UIY3 292 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 TSR3Q9UJK0 312 aaKnown RBP9.79□□□□□ -0.84
HMGN1-201ENST00000288344 PCDHB5Q9Y5E4 795 aa9.79□□□□□ -0.84
HMGN1-201ENST00000288344 ZNF638Q14966 1978 aaKnown RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 OBSL1O75147 1896 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TNFRSF10BO14763 440 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 RNF40O75150 1001 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TADA3O75528 432 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 NOL4O94818 638 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CEBPBP17676 345 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 SP100P23497 879 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 PCSK1P29120 753 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 GPR15P49685 360 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CDR1P51861 262 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 MYL7Q01449 175 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TRPC3Q13507 836 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 DPCR1Q3MIW9 517 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 FUKQ8N0W3 1084 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 LEMD2Q8NC56 503 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 ZMIZ2Q8NF64 920 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 RSPRY1Q96DX4 576 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 SPATA17Q96L03 361 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CEP295NLQ96MC4 621 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 ZNF512Q96ME7 567 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 SYT15Q9BQS2 421 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CORO1BQ9BR76 489 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 LRFN3Q9BTN0 628 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CYP3A43Q9HB55 503 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 CSNK1G1Q9HCP0 422 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 HMGXB4Q9UGU5 601 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 ARMCX3Q9UH62 379 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-201ENST00000288344 SORCS3Q9UPU3 1222 aa9.78□□□□□ -0.84
HMGN1-201ENST00000288344 USP34Q70CQ2 3546 aa9.77□□□□□ -0.84
HMGN1-201ENST00000288344 FAM92AA1XBS5 289 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ARNTLO00327 626 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 CILPO75339 1184 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 LRG1P02750 347 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 EPB41P11171 864 aaKnown RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 NPR3P17342 541 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ACO1P21399 889 aaKnown RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ERCC5P28715 1186 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 RAP1GAPP47736 663 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 FMO5P49326 533 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 STX17P56962 302 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 NLRP12P59046 1061 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 PSMC1P62191 440 aaKnown RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 TSPY1Q01534 308 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 PAK1Q13153 545 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 BIRC3Q13489 604 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 TDGQ13569 410 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 MTMR3Q13615 1198 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 DDR2Q16832 855 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF699Q32M78 642 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF667Q5HYK9 610 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 CT47A1Q5JQC4 288 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 FAM78AQ5JUQ0 283 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 TANGO2Q6ICL3 276 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 VSTM1Q6UX27 236 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 B3GALNT2Q8NCR0 500 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 FBXL13Q8NEE6 735 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 MYLPFQ96A32 169 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 ACSF2Q96CM8 615 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 TRMT2BQ96GJ1 504 aaKnown RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 C8orf48Q96LL4 319 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 MMS19Q96T76 1030 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 TSG101Q99816 390 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 FAM124BQ9H5Z6 455 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 DUSP12Q9UNI6 340 aa9.77□□□□□ -0.85
HMGN1-201ENST00000288344 MRPS23Q9Y3D9 190 aaKnown RBP9.77□□□□□ -0.85
HMGN1-201ENST00000288344 CACNA1HO95180 2353 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 WDR87Q6ZQQ6 2873 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 BICDL2A1A5D9 508 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 HHLA1C9JL84 531 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 ZNF197O14709 1029 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 P4HA2O15460 535 aa9.76□□□□□ -0.85
HMGN1-201ENST00000288344 NARSO43776 548 aaKnown RBP9.76□□□□□ -0.85
HMGN1-201ENST00000288344 PHACTR2O75167 634 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms