RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 C12orf50Q8NA57 414 aaPredicted RBP23.24■■□□□ 1.31
CCDC7-201ENST00000277657 CASKIN2Q8WXE0 1202 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 LINC01599Q8WXQ3 324 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 PAAF1Q9BRP4 392 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 PLEKHA4Q9H4M7 779 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 TTI1O43156 1089 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 EOMESO95936 686 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 SELPP16109 830 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 CARSP49589 748 aaKnown RBP23.24■■□□□ 1.31
CCDC7-201ENST00000277657 SNX16P57768 344 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 DHX34Q14147 1143 aaKnown RBP23.24■■□□□ 1.31
CCDC7-201ENST00000277657 ACAP1Q15027 740 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 OR6B2Q6IFH4 312 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 OLFML1Q6UWY5 402 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 LRRC8DQ7L1W4 858 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 POLNQ7Z5Q5 900 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 ARFGAP1Q8N6T3 406 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 SLC2A14Q8TDB8 520 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 MAIP1Q8WWC4 291 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 SEC14L1Q92503 715 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 HNRNPABQ99729 332 aaKnown RBP23.24■■□□□ 1.31
CCDC7-201ENST00000277657 CYLDQ9NQC7 956 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 PCYOX1Q9UHG3 505 aa23.24■■□□□ 1.31
CCDC7-201ENST00000277657 ESYT3A0FGR9 886 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 LRCH4O75427 683 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 ADORA2BP29275 332 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 LHX1P48742 406 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 TUSC3Q13454 348 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 RCOR2Q8IZ40 523 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 MAGOHBQ96A72 148 aaKnown RBP23.23■■□□□ 1.31
CCDC7-201ENST00000277657 HERPUD2Q9BSE4 406 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 BEGAINQ9BUH8 593 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 OGDHLQ9ULD0 1010 aa23.23■■□□□ 1.31
CCDC7-201ENST00000277657 PTPN1P18031 435 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 PAX3P23760 479 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 TKTP29401 623 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 EPHB4P54760 987 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 SLC25A11Q02978 314 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 KLF1Q13351 362 aaPredicted RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 MTFR1Q15390 333 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 ATP13A4Q4VNC1 1196 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 ZDHHC17Q8IUH5 632 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 PIWIL1Q96J94 861 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 UROC1Q96N76 676 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 DEFB118Q96PH6 123 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 LRRC19Q9H756 370 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 OGFRQ9NZT2 677 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 C2CD4BA6NLJ0 364 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 PIK3R2O00459 728 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 ATP2C2O75185 946 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 ZNF143P52747 638 aaPredicted RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 DR1Q01658 176 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 BFSP2Q13515 415 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 CASP8Q14790 479 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 TIGD5Q53EQ6 642 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 TXNRD3NBQ6F5E7 133 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 TTC27Q6P3X3 843 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 EMBQ6PCB8 327 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 CD300LGQ6UXG3 332 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 DSTYKQ6XUX3 929 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 FUKQ8N0W3 1084 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 RBM41Q96IZ5 413 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 FTHL17Q9BXU8 183 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 DDX43Q9NXZ2 648 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 DDX56Q9NY93 547 aaKnown RBP23.22■■□□□ 1.31
CCDC7-201ENST00000277657 INPP5FQ9Y2H2 1132 aa23.22■■□□□ 1.31
CCDC7-201ENST00000277657 FAM187AA6NFU0 413 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 PAPSS1O43252 624 aaPredicted RBP23.21■■□□□ 1.31
CCDC7-201ENST00000277657 RALAP11233 206 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 IBSPP21815 317 aaPredicted RBP23.21■■□□□ 1.31
CCDC7-201ENST00000277657 GJC1P36383 396 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 PTGIRP43119 386 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 SLC6A3Q01959 620 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 CUL1Q13616 776 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 TRADDQ15628 312 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 KIAA0319Q5VV43 1072 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 TRNP1Q6NT89 227 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 CCDC50Q8IVM0 306 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.21■■□□□ 1.319e-10■■■■■ 79.8
CCDC7-201ENST00000277657 KHSRPQ92945 711 aaKnown RBP eCLIP23.21■■□□□ 1.31
CCDC7-201ENST00000277657 RUNDC3BQ96NL0 473 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 OSBPL8Q9BZF1 889 aa23.21■■□□□ 1.31
CCDC7-201ENST00000277657 ACAT1P24752 427 aaKnown RBP23.2■■□□□ 1.3
CCDC7-201ENST00000277657 PLA2G4AP47712 749 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 FNTAP49354 379 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 COPS2P61201 443 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 GPNMBQ14956 572 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 PAQR9Q6ZVX9 377 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 ANKS1BQ7Z6G8 1248 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 SPATA18Q8TC71 538 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 IFT81Q8WYA0 676 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 HSFY1Q96LI6 401 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 SLITRK1Q96PX8 696 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 CNPY3Q9BT09 278 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 NFU1Q9UMS0 254 aa23.2■■□□□ 1.3
CCDC7-201ENST00000277657 B3GAT3O94766 335 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CCL5P13501 91 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 GPD1P21695 349 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 PTPN7P35236 360 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 SCNN1AP37088 669 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms