RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 H7C1Q1 480 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 IRS4O14654 1257 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 TNPO2O14787 897 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ARHGEF9O43307 516 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CTRB1P17538 263 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FGFR4P22455 802 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KELP23276 732 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 PSMA2P25787 234 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 HSD17B4P51659 736 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KPNB1Q14974 876 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CTRB2Q6GPI1 263 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 MAMDC2Q7Z304 686 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 DENND6AQ8IWF6 608 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 EXD1Q8NHP7 514 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SMARCAD1Q9H4L7 1026 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 KCNN3Q9UGI6 736 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 LRFN2Q9ULH4 789 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 MAPRE3Q9UPY8 281 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 COQ6Q9Y2Z9 468 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FADS2P1A8MWK0 482 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CENPBD1B2RD01 187 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 DAB1O75553 588 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF806P0C7X5 589 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 PDE6AP16499 860 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 EPHB1P54762 984 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 NPEPPSP55786 919 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 PFKPQ01813 784 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 XRRA1Q6P2D8 792 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SLC30A10Q6XR72 485 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 COMTD1Q86VU5 262 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CCDC197Q8NCU1 140 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CCDC43Q96MW1 224 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ZSWIM6Q9HCJ5 1215 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 DIABLOQ9NR28 239 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 MPP6Q9NZW5 540 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 ZSWIM5Q9P217 1185 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 GIMAP2Q9UG22 337 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 RUVBL1Q9Y265 456 aaKnown RBP9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 CYP46A1Q9Y6A2 500 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 DGKBQ9Y6T7 804 aa9.26□□□□□ -0.93
CTDSPL-201ENST00000273179 SPDYE2BA6NHP3 402 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 MTX2O75431 263 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SPDYE6P0CI01 402 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 GHRP10912 638 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 MAP4P27816 1152 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RFC4P35249 363 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 COPS2P61201 443 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 EXOSC10Q01780 885 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 YTHDF3Q7Z739 585 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ARHGAP24Q8N264 748 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PHKBQ93100 1093 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 TM9SF2Q99805 663 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 GCOM2Q9BZD3 368 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 USP6P35125 1406 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 A6NHS1 94 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 NPIPA7E9PJI5 369 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 NPIPA8P0DM63 369 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 DDX6P26196 483 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RGS2P41220 211 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RAB15P59190 212 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ATAD3BQ5T9A4 648 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 EPM2AIP1Q7L775 607 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 GALNT5Q7Z7M9 940 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 DHRS9Q9BPW9 319 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 AZI2Q9H6S1 392 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RPH3AQ9Y2J0 694 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 UBN2Q6ZU65 1347 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ADGRB2O60241 1585 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 F6X3S4 739 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PPEF1O14829 653 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 MGRN1O60291 552 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RETP07949 1114 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 UBTFL6P0CB48 400 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PRKAR1AP10644 381 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 OSBPP22059 807 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF75DP51815 510 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 NLRP11P59045 1033 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RAC1P63000 192 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PRAMEP78395 509 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 PLOD1Q02809 727 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 CHAF1BQ13112 559 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 SETD3Q86TU7 594 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ZNF473Q8WTR7 871 aaKnown RBP9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 RASSF5Q8WWW0 418 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 LURAP1Q96LR2 239 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 CDH19Q9H159 772 aa9.25□□□□□ -0.93
CTDSPL-201ENST00000273179 ABI2Q9NYB9 513 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms