RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 E5RJQ4 531 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 ZBED1O96006 694 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 DLDP09622 509 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 MYL2P10916 166 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 STAT3P40763 770 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 FAM26FQ5R3K3 315 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 SEL1L2Q5TEA6 688 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 TMPRSS6Q8IU80 811 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 SNF8Q96H20 258 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 TTC25Q96NG3 672 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 CENPOQ9BU64 300 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 EIF2AQ9BY44 585 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 GBA3Q9H227 469 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC38A7Q9NVC3 462 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
CTDSP1-201ENST00000273062 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 TMX2-CTNND1H3BSU7 103 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 CD48P09326 243 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 MESDQ14696 234 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 ANO5Q75V66 913 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 AMIGO2Q86SJ2 522 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 SCAIQ8N9R8 606 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 SCFD1Q8WVM8 642 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 COX4I2Q96KJ9 171 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 KLF6Q99612 283 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 TUBB6Q9BUF5 446 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 DRC3Q9H069 523 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 ATAD3AQ9NVI7 634 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 SLC17A7Q9P2U7 560 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 NUB1Q9Y5A7 615 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 GOLGA8RI6L899 631 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 MEIS2O14770 477 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 HSPA6P17066 643 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 KRT4P19013 534 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 NR2F2P24468 414 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 EIF2B2P49770 351 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 STAT4Q14765 748 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 FASTKD3Q14CZ7 662 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 EPHA7Q15375 998 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 PPP1R2P3Q6NXS1 205 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 POTEHQ6S545 545 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 RAD54LQ92698 747 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 CNBD2Q96M20 576 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 ANO3Q9BYT9 981 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 GPAMQ9HCL2 828 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 ZNHIT2Q9UHR6 403 aa16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 TMA7Q9Y2S6 64 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-201ENST00000273062 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 MARCH6O60337 910 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 BCAP31P51572 246 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ORC2Q13416 577 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 PDE1CQ14123 709 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 CYTH1Q15438 398 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 HSF5Q4G112 596 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 HSP90AA5PQ58FG0 334 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 C6orf163Q5TEZ5 329 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 HERPUD2Q9BSE4 406 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 NDEL1Q9GZM8 345 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 RRN3Q9NYV6 651 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ANAPC5Q9UJX4 755 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 DYTNA2CJ06 578 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 CAPN14A8MX76 684 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 K7EPI3 171 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 DNAJA2O60884 412 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ITIH2P19823 946 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 FDFT1P37268 417 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 ZNF200P98182 395 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 KRT79Q5XKE5 535 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 IQCF2Q8IXL9 164 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 CCDC124Q96CT7 223 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 VPS50Q96JG6 964 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 OSBPL10Q9BXB5 764 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 MAD1L1Q9Y6D9 718 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 IVNS1ABPQ9Y6Y0 642 aa16.43■□□□□ 0.22
CTDSP1-201ENST00000273062 A0A088AWK7 358 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 DMPKQ09013 629 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 CCNIQ14094 377 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 KRT81Q14533 505 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 OGFOD2Q6N063 350 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 LZTR1Q8N653 840 aa16.42■□□□□ 0.22
CTDSP1-201ENST00000273062 EFCAB3Q8N7B9 438 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms