RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 C2orf15Q8WU43 125 aaKnown RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 CYP2S1Q96SQ9 504 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 MTMR12Q9C0I1 747 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 GZF1Q9H116 711 aaPredicted RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 SMOC1Q9H4F8 434 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 PCIF1Q9H4Z3 704 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 OLFML3Q9NRN5 406 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 TMEM30AQ9NV96 361 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 DDX43Q9NXZ2 648 aaKnown RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 GCNT4Q9P109 453 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 GTF3C4Q9UKN8 822 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 CDV3Q9UKY7 258 aaKnown RBP9.63□□□□□ -0.87
TPM3-201ENST00000271850 AGAP1Q9UPQ3 857 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 PCDHB5Q9Y5E4 795 aa9.63□□□□□ -0.87
TPM3-201ENST00000271850 SPEGQ15772 3267 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 C2orf78A6NCI8 922 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 TM4SF5O14894 197 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 ATP2C2O75185 946 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 PRPF40AO75400 957 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 PRPF6O94906 941 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 IL18RAPO95256 599 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 ADRB1P08588 477 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 LMO2P25791 158 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 GJA4P35212 333 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 USP46P62068 366 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 TFAMQ00059 246 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 MESP2Q0VG99 397 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 VEPH1Q14D04 833 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 SF3A2Q15428 464 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 SV2CQ496J9 727 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 FAM171BQ6P995 826 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 C1orf228Q6PIY5 440 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 KBTBD6Q86V97 674 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 MON1AQ86VX9 555 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 METTL23Q86XA0 190 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 NT5DC4Q86YG4 428 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 THEM5Q8N1Q8 247 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 SYNPOQ8N3V7 929 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 RASSF8Q8NHQ8 419 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 NETO1Q8TDF5 533 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 MYRFLQ96LU7 910 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 ZNF560Q96MR9 790 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 ACBD6Q9BR61 282 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 CRTAC1Q9NQ79 661 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 TDP1Q9NUW8 608 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
TPM3-201ENST00000271850 RBAKQ9NYW8 714 aaPredicted RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 MAGED2Q9UNF1 606 aaPredicted RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
TPM3-201ENST00000271850 RALGAPA1Q6GYQ0 2036 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 CEP295Q9C0D2 2601 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 EPN2O95208 641 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 GCNT3O95395 438 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 SYT1P21579 422 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 GARTP22102 1010 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 CNR2P34972 360 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 GALK1P51570 392 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 PSMC1P62191 440 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 CEBPZQ03701 1054 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 SMARCB1Q12824 385 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 BFSP1Q12934 665 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ZNF268Q14587 947 aaPredicted RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 PPP2R5DQ14738 602 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 MTF1Q14872 753 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 EML3Q32P44 896 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 CFAP221Q4G0U5 840 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 PPM1JQ5JR12 505 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 RRAGBQ5VZM2 374 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 CBWD2Q8IUF1 395 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 SFTPA1Q8IWL2 248 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 CSGALNACT2Q8N6G5 542 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 LRRC52Q8N7C0 313 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 GAB3Q8WWW8 586 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 SECISBP2LQ93073 1101 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 TRMT2BQ96GJ1 504 aaKnown RBP9.61□□□□□ -0.87
TPM3-201ENST00000271850 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 HHIPQ96QV1 700 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 PANK2Q9BZ23 570 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ARRDC1-AS1Q9H2J1 176 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 LINC00597Q9H2U6 94 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 ABCB6Q9NP58 842 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
TPM3-201ENST00000271850 SNX9Q9Y5X1 595 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms