RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 FAXCQ5TGI0 409 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 CDCA2Q69YH5 1023 aaPredicted RBP11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SCYL2Q6P3W7 929 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 XYLT1Q86Y38 959 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SLC4A11Q8NBS3 891 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 FBXO36Q8NEA4 188 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SPATA18Q8TC71 538 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 FGD4Q96M96 766 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 TMEM237Q96Q45 408 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SMC6Q96SB8 1091 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 NOD2Q9HC29 1040 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 CHMP2BQ9UQN3 213 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 AKT3Q9Y243 479 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 ARL2BPQ9Y2Y0 163 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 CLUHO75153 1309 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 TCEA3O75764 348 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 ATP6V1G2O95670 118 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 KRT16P08779 473 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 RPSAP08865 295 aaKnown RBP11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 STAG3L1P0CL83 205 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 POLR2BP30876 1174 aaKnown RBP11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 OVGP1Q12889 678 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SLC35B2Q8TB61 432 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 FBF1Q8TES7 1133 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 PEBP4Q96S96 227 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 PTPRHQ9HD43 1115 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
PRUNE1-201ENST00000271620 SIGLEC16A6NMB1 481 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 MICAL2O94851 1124 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ASMTLO95671 621 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ITGAVP06756 1048 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ZNF286BP0CG31 522 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 TGFB3P10600 412 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 RBP3P10745 1247 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 YWHAEP62258 255 aaKnown RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 PTPN11Q06124 597 aaPredicted RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 TSHZ1Q6ZSZ6 1077 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 IGDCC3Q8IVU1 814 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 IFT122Q9HBG6 1241 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 USP18Q9UMW8 372 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 F5H423 210 aaPredicted RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ALOX15BO15296 676 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 MGRN1O60291 552 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 INSRRP14616 1297 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ADRA1DP25100 572 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 EIF3EP60228 445 aaKnown RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 COPS2P61201 443 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 RNASELQ05823 741 aaKnown RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 KCTD2Q14681 263 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 MTFR1Q15390 333 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 AMHR2Q16671 573 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ACCSLQ4AC99 568 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 TRNP1Q6NT89 227 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 LVRNQ6Q4G3 990 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 PPP1R21Q6ZMI0 780 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 P3H4Q92791 437 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 NKD2Q969F2 451 aaPredicted RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 ERP27Q96DN0 273 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 TRIM56Q9BRZ2 755 aaKnown RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 MAGEB5Q9BZ81 275 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 PCDH9Q9HC56 1237 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 RBPJLQ9UBG7 517 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 XPO7Q9UIA9 1087 aaKnown RBP11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
PRUNE1-201ENST00000271620 E5RJQ4 531 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 CNMDO75829 334 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 CYP2C8P10632 490 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 TARSP26639 723 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 AP3M2P53677 418 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 CDH6P55285 790 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 SMAD1Q15797 465 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 PALM2Q8IXS6 379 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 KIRREL3Q8IZU9 778 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 FZD8Q9H461 694 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 FAM49BQ9NUQ9 324 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 NR2E3Q9Y5X4 410 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 LAMA2P24043 3122 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 HCRTO43612 131 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 RNF8O76064 485 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 PROZP22891 400 aa11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
PRUNE1-201ENST00000271620 OR6B2Q6IFH4 312 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms