RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
CDH11-201ENST00000268603 PMPCBO75439 489 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 SCP2P22307 547 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 YY1P25490 414 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 NPY2RP49146 381 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 RHAGQ02094 409 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 RPRD1AQ96P16 312 aaPredicted RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 MFN2O95140 757 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 TRABDQ9H4I3 376 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TRIM39Q9HCM9 518 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 CTSEP14091 401 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TCEA2Q15560 299 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TTC33Q6PID6 262 aaPredicted RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 THG1LQ9NWX6 298 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 SAC3D1A6NKF1 404 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ZC3H11AO75152 810 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH11-201ENST00000268603 SERAC1Q96JX3 654 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 CYP2C9P11712 490 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 FGFR2P21802 821 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ITGADQ13349 1161 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 CCL15Q16663 113 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 RHBGQ9H310 441 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TEX33O43247 280 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 BMP10O95393 424 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ZNF682O95780 498 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ODC1P11926 461 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 HALP42357 657 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 AMHR2Q16671 573 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 NFRKBQ6P4R8 1299 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 PEG10Q86TG7 708 aaKnown RBP13.07□□□□□ -0.32
CDH11-201ENST00000268603 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 TRPC4APQ8TEL6 797 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 KRT35Q92764 455 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 ARHGEF26Q96DR7 871 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 PANX2Q96RD6 677 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
CDH11-201ENST00000268603 POLBP06746 335 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 NRG3P56975 720 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 GRAMD1AQ96CP6 724 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 CLIP3Q96DZ5 547 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 TBCDQ9BTW9 1192 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 ARF4P18085 180 aaPredicted RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 IL2P60568 153 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 BIKQ13323 160 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 ROGDIQ9GZN7 287 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 HPS5Q9UPZ3 1129 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 SCGNO76038 276 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 SPRP35270 261 aaPredicted RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 EFL1Q7Z2Z2 1120 aaKnown RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 NSUN7Q8NE18 718 aaKnown RBP13.06□□□□□ -0.32
CDH11-201ENST00000268603 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 TCP11X1B4DZS4 312 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 PRODHO43272 600 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 CYP2C19P33261 490 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 DNAL1Q4LDG9 190 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 DOK6Q6PKX4 331 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 MYO1HQ8N1T3 1032 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 SH2D3AQ9BRG2 576 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 C17orf102A2RUQ5 167 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 TPST1O60507 370 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 NEK7Q8TDX7 302 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
CDH11-201ENST00000268603 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
CDH11-201ENST00000268603 HNMTP50135 292 aa13.05□□□□□ -0.32
CDH11-201ENST00000268603 EPHB3P54753 998 aa13.05□□□□□ -0.32
CDH11-201ENST00000268603 SLC30A9Q6PML9 568 aa13.05□□□□□ -0.32
CDH11-201ENST00000268603 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
CDH11-201ENST00000268603 ZNF786Q8N393 782 aa13.05□□□□□ -0.32
CDH11-201ENST00000268603 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms