RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PIGWQ7Z7B1 504 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 RELL1Q8IUW5 271 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SLC4A11Q8NBS3 891 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 CCT6BQ92526 530 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 PRMT7Q9NVM4 692 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SAE1Q9UBE0 346 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 A0A087WZ62 844 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 CCT8L1PA6NM43 557 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 M0QYV0 167 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 CDH16O75309 829 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 LRCH4O75427 683 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 MICAL2O94851 1124 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 ABHD2P08910 425 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 HNRNPH1P31943 449 aaKnown RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 SCTRP47872 440 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 RGS19P49795 217 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 MPP2Q14168 576 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 CEP128Q6ZU80 1094 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 DPH6Q7L8W6 267 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 XYLT1Q86Y38 959 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 LHX5Q9H2C1 402 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 ERAP1Q9NZ08 941 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
CPSF6-201ENST00000266679 DRG1Q9Y295 367 aaKnown RBP13.56□□□□□ -0.24
CPSF6-201ENST00000266679 EXOC1LA0A1B0GW35 172 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 GOLGA8MH3BSY2 632 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 VTNP04004 478 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 LGALS2P05162 132 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ITGAVP06756 1048 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 INSRRP14616 1297 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ARHGAP1Q07960 439 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ITIH4Q14624 930 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 PKN2Q16513 984 aaKnown RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 HADHQ16836 314 aaKnown RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 LACTB2Q53H82 288 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 POLNQ7Z5Q5 900 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 CFAP57Q96MR6 1250 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 VPS37BQ9H9H4 285 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 PCDH9Q9HC56 1237 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 FGFR1OP2Q9NVK5 253 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 POC1B-GALNT4F8VUJ3 575 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 BANF1O75531 89 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 CD48P09326 243 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ZNF286BP0CG31 522 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 MORF4L2Q15014 288 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ZKSCAN8Q15776 578 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 AMHR2Q16671 573 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 RNASEH2BQ5TBB1 312 aaKnown RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 TAB3Q8N5C8 712 aaPredicted RBP13.55□□□□□ -0.24
CPSF6-201ENST00000266679 ACTL9Q8TC94 416 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 P3H4Q92791 437 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 KDM4CQ9H3R0 1056 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 MROH8Q9H579 483 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 HAUS2Q9NVX0 235 aa13.55□□□□□ -0.24
CPSF6-201ENST00000266679 PIK3R2O00459 728 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CST8O60676 142 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 KRT7P08729 469 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 MCF2P10911 925 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 GDF10P55107 478 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 TNFAIP2Q03169 654 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 ANKMY2Q8IV38 441 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 SLC35B2Q8TB61 432 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CKAP2Q8WWK9 683 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 HSPH1Q92598 858 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 TMEM176AQ96HP8 235 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 TTC25Q96NG3 672 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 SLC40A1Q9NP59 571 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 EURLQ9NYK6 297 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 NKIRAS1Q9NYS0 192 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CITO14578 2027 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 ASB14A6NK59 587 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 RASA4BC9J798 803 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 PDHXO00330 501 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 RASA4O43374 803 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CILPO75339 1184 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 CYP2C8P10632 490 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 GHRP10912 638 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 KDELR1P24390 212 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 GCAP28676 217 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 STX2P32856 288 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms