RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 ARL14EPQ8N8R7 260 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-202ENST00000262396 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 OR5B17Q8NGF7 314 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 MYLPFQ96A32 169 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
TRAF4-202ENST00000262396 CYP2S1Q96SQ9 504 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 FAM83CQ9BQN1 747 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.09□□□□□ -0.31
TRAF4-202ENST00000262396 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
TRAF4-202ENST00000262396 TCHHQ07283 1943 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 A8MXQ7 604 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 POLR2DO15514 142 aaKnown RBP13.08□□□□□ -0.32
TRAF4-202ENST00000262396 EXOC3O60645 756 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 ATP2C2O75185 946 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 PAPSS2O95340 614 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-202ENST00000262396 YEATS4O95619 227 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 NFATC1O95644 943 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 TDGF1P13385 188 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 MAGEA11P43364 429 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 AFMP43652 599 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 GALK1P51570 392 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 TDRD10Q5VZ19 366 aaKnown RBP13.08□□□□□ -0.32
TRAF4-202ENST00000262396 DENND5BQ6ZUT9 1274 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 UNC13DQ70J99 1090 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 NETO1Q8TDF5 533 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 CD101Q93033 1021 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 ACDQ96AP0 544 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 ECT2Q9H8V3 914 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 HPS4Q9NQG7 708 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 AGPAT3Q9NRZ7 376 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
TRAF4-202ENST00000262396 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 WNT6Q9Y6F9 365 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-202ENST00000262396 UBE4BO95155 1302 aa13.08□□□□□ -0.32
TRAF4-202ENST00000262396 SCN1AP35498 2009 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 K7ESF4 209 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 GABRDO14764 452 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 HCRTO43612 131 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 EGFP01133 1207 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 LMO2P25791 158 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 GJA4P35212 333 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 SNRPFP62306 86 aaKnown RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 ELF2Q15723 593 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 CSRP2Q16527 193 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 PRR23CQ6ZRP0 262 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 TMEM150AQ86TG1 271 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 FAM160A2Q8N612 972 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 RPLP0P6Q8NHW5 317 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 SYAP1Q96A49 352 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 MYRFLQ96LU7 910 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 SLITRK1Q96PX8 696 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 CGRRF1Q99675 332 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 NACA2Q9H009 215 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 BLZF1Q9H2G9 400 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 SLC39A2Q9NP94 309 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
TRAF4-202ENST00000262396 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-202ENST00000262396 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 P4HA1P13674 534 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 GBP1P32455 592 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 PPP3CCP48454 512 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 PSMD6Q15008 389 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 FAM171BQ6P995 826 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
TRAF4-202ENST00000262396 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 CEP295NLQ96MC4 621 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 HHIPQ96QV1 700 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 BACH2Q9BYV9 841 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
TRAF4-202ENST00000262396 ARRDC1-AS1Q9H2J1 176 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms