RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 DDX39BQ13838 428 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC81Q6ZN84 652 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 TRPM8Q7Z2W7 1104 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 MIB1Q86YT6 1006 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PCYOX1LQ8NBM8 494 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 EXOSC4Q9NPD3 245 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 MTO1Q9Y2Z2 717 aaKnown RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 DAB1O75553 588 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PON1P27169 355 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 NCALDP61601 193 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PLEKHM3Q6ZWE6 761 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ATP6V0D2Q8N8Y2 350 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PPP2R3CQ969Q6 453 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 THAP11Q96EK4 314 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ZNF512BQ96KM6 892 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ZFP42Q96MM3 310 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 GRID1Q9ULK0 1009 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 RNF112Q9ULX5 631 aa12.57□□□□□ -0.4
COL8A1-201ENST00000261037 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 KLHL2O95198 593 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 MBL2P11226 248 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SLC16A1P53985 500 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 MAP3K7CLP57077 242 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 AGGF1Q8N302 714 aaeCLIP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 RPRD1AQ96P16 312 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 PACSIN1Q9BY11 444 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ISCUQ9H1K1 167 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SCUBE2Q9NQ36 999 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ARP10275 920 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ACO1P21399 889 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 TGM2P21980 687 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SERPINB10P48595 397 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 JADE3Q92613 823 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 IGF2BP3O00425 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SLC26A4O43511 780 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 GLRBP48167 497 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ALDH7A1P49419 539 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 NUDT2P50583 147 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SOX10P56693 466 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 CLEC16AQ2KHT3 1053 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SGSM3Q96HU1 749 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 IARS2Q9NSE4 1012 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 SPTLC1O15269 473 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 APOA1P02647 267 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 LSP1P33241 339 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 FAM180AQ6UWF9 173 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 DNAAF5Q86Y56 855 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 TRIM48Q8IWZ4 208 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 PNKPQ96T60 521 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 UNKQ9C0B0 810 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 RAD18Q9NS91 495 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 USE1Q9NZ43 259 aa12.56□□□□□ -0.4
COL8A1-201ENST00000261037 TRMT6Q9UJA5 497 aaKnown RBP12.56□□□□□ -0.4
COL8A1-201ENST00000261037 ICAM1P05362 532 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 IYDQ6PHW0 289 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 TMCO5AQ8N6Q1 288 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ANKEF1Q9NU02 776 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC159P0C7I6 412 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CDH2P19022 906 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 HSD17B3P37058 310 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 KCTD17Q8N5Z5 321 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 FBXO36Q8NEA4 188 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CMTM5Q96DZ9 223 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 RIC8BQ9NVN3 520 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 TECPR2O15040 1411 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 SPATA31D1Q6ZQQ2 1576 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 RRN3P2A6NIE6 340 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 GUCA1CO95843 209 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ASS1P00966 412 aaKnown RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 FCGRTP55899 365 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CYP4F12Q9HCS2 524 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 GID8Q9NWU2 228 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms