RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SIX1Q15475 284 aaPredicted RBP23.55■■□□□ 1.36
SIX3-201ENST00000260653 TXNRD3NBQ6F5E7 133 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 DSTYKQ6XUX3 929 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 SLC24A5Q71RS6 500 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 CCDC50Q8IVM0 306 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 FNIP1Q8TF40 1166 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 TTI1O43156 1089 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 BST2Q10589 180 aaKnown RBP23.55■■□□□ 1.36
SIX3-201ENST00000260653 TRADDQ15628 312 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 TIGD5Q53EQ6 642 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 ARFGAP1Q8N6T3 406 aa23.55■■□□□ 1.36
SIX3-201ENST00000260653 DDX43Q9NXZ2 648 aaKnown RBP23.55■■□□□ 1.36
SIX3-201ENST00000260653 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.55■■□□□ 1.36
SIX3-201ENST00000260653 I3L4J1 428 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 RARAP10276 462 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 KIAA0319Q5VV43 1072 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 IFT20Q8IY31 132 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 HASPINQ8TF76 798 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 GDAP1L1Q96MZ0 367 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 MIS12Q9H081 205 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 FSCN2O14926 492 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 PHF2O75151 1096 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 GRAP2O75791 330 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 B3GAT3O94766 335 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 AARSP49588 968 aaKnown RBP eCLIP23.54■■□□□ 1.36
SIX3-201ENST00000260653 TUSC3Q13454 348 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 MAP9Q49MG5 647 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 OLFML1Q6UWY5 402 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 ANKS1BQ7Z6G8 1248 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 TMEM110Q86TL2 294 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 CCDC26Q8TAB7 109 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 CASKIN2Q8WXE0 1202 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 B3GNT5Q9BYG0 378 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 DNAI2Q9GZS0 605 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 OGDHLQ9ULD0 1010 aa23.54■■□□□ 1.36
SIX3-201ENST00000260653 NBNO60934 754 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 LRCH4O75427 683 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 PTPN1P18031 435 aaKnown RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 TNFRSF8P28908 595 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 CARSP49589 748 aaKnown RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 TRNP1Q6NT89 227 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 SCUBE3Q8IX30 993 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 FUKQ8N0W3 1084 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 STK32AQ8WU08 396 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 ACSF2Q96CM8 615 aaPredicted RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 TET1Q8NFU7 2136 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 PI4K2BG5E9Z4 385 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 PAPSS1O43252 624 aaPredicted RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 PQBP1O60828 265 aaKnown RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 FAM163BP0C2L3 166 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 BFSP2Q13515 415 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 GPNMBQ14956 572 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 TAF5Q15542 800 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 CLLU1OSQ5K130 101 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 LRRC38Q5VT99 294 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 TMEM86AQ8N2M4 240 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 EXD1Q8NHP7 514 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 MAGOHBQ96A72 148 aaKnown RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 RNF25Q96BH1 459 aaPredicted RBP23.53■■□□□ 1.36
SIX3-201ENST00000260653 MTUS1Q9ULD2 1270 aa23.53■■□□□ 1.36
SIX3-201ENST00000260653 CLDN5O00501 218 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 RALAP11233 206 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 MDH1BQ5I0G3 518 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 ZFYVE27Q5T4F4 411 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 TTC27Q6P3X3 843 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 MAATS1Q7Z4T9 603 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 AENQ8WTP8 325 aaKnown RBP23.52■■□□□ 1.36
SIX3-201ENST00000260653 IFT81Q8WYA0 676 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 HEMGNQ9BXL5 484 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 SEZ6LQ9BYH1 1024 aa23.52■■□□□ 1.36
SIX3-201ENST00000260653 F8W810 466 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 INPPL1O15357 1258 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 EOMESO95936 686 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 FLT3P36888 993 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 BRCC3P46736 316 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 PPP2R5EQ16537 467 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 CD300LGQ6UXG3 332 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 HNRNPABQ99729 332 aaKnown RBP23.52■■□□□ 1.35
SIX3-201ENST00000260653 CRTAC1Q9NQ79 661 aa23.52■■□□□ 1.35
SIX3-201ENST00000260653 B4GALT3O60512 393 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 KRT1P04264 644 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 ITGB1P05556 798 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 LHX1P48742 406 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 ATN1P54259 1190 aaPredicted RBP23.51■■□□□ 1.35
SIX3-201ENST00000260653 DR1Q01658 176 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 SLC25A11Q02978 314 aaKnown RBP23.51■■□□□ 1.35
SIX3-201ENST00000260653 GLB1LQ6UWU2 654 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 CNPY4Q8N129 248 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 TRIM51Q9BSJ1 452 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 NFU1Q9UMS0 254 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 C2CD4BA6NLJ0 364 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 CHRNA3P32297 505 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 SMC1AQ14683 1233 aaKnown RBP23.51■■□□□ 1.35
SIX3-201ENST00000260653 CYP1B1Q16678 543 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 PAQR9Q6ZVX9 377 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 CLEC4CQ8WTT0 213 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 RXFP2Q8WXD0 754 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 OSBPL8Q9BZF1 889 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 TSC2P49815 1807 aa23.51■■□□□ 1.35
SIX3-201ENST00000260653 SPDYE4A6NLX3 237 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms