RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CYFIP2Q96F07 1278 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 CNPY3Q9BT09 278 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 H3BRB1 525 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 RPRD1AQ96P16 312 aaPredicted RBP19.72■□□□□ 0.75
PTPRE-201ENST00000254667 TUT1Q9H6E5 874 aaKnown RBP19.72■□□□□ 0.75
PTPRE-201ENST00000254667 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 CCDC78A2IDD5 438 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 ENO1P06733 434 aaKnown RBP19.72■□□□□ 0.75
PTPRE-201ENST00000254667 RAB27AP51159 221 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 TMEM176AQ96HP8 235 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 ZIM3Q96PE6 472 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 SLC7A5P2Q9GIP4 190 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 VTA1Q9NP79 307 aa19.72■□□□□ 0.75
PTPRE-201ENST00000254667 H0Y626 953 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 STX7O15400 261 aaKnown RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 AKAP3O75969 853 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 VTNP04004 478 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 KDSRQ06136 332 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 ZNF507Q8TCN5 953 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 SCHIP1Q9P0W5 487 aaPredicted RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 ANKRD65E5RJM6 399 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 SLFN11Q7Z7L1 901 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 FBXO32Q969P5 355 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 TTLL9Q3SXZ7 439 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 POTEAQ6S8J7 498 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 PATL1Q86TB9 770 aaKnown RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 HOMEZQ8IX15 550 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 NOA1Q8NC60 698 aaKnown RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 TAS1R2Q8TE23 839 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 SLC5A5Q92911 643 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 VEGFAP15692 232 aaPredicted RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 ETFBP38117 255 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 FAM83EQ2M2I3 478 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 AARS2Q5JTZ9 985 aaKnown RBP19.71■□□□□ 0.75
PTPRE-201ENST00000254667 PSD3Q9NYI0 1048 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 TRAF3IP3Q9Y228 551 aa19.71■□□□□ 0.75
PTPRE-201ENST00000254667 PPLO60437 1756 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 PROSCO94903 275 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 NFE2Q16621 373 aaPredicted RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 ZRANB3Q5FWF4 1079 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 DACT2Q5SW24 774 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 MRNIPQ6NTE8 343 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 C3orf67Q6ZVT6 689 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 MRPS31Q92665 395 aaKnown RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 E2F7Q96AV8 911 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 SPATA16Q9BXB7 569 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 CISHQ9NSE2 258 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 WHRNQ9P202 907 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 MANSC4A6NHS7 340 aaPredicted RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 RHOBTB1O94844 696 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 PLA2G4AP47712 749 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 RAD23BP54727 409 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 EXD1Q8NHP7 514 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 ACTRT1Q8TDG2 376 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 A0A087WZ62 844 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 SPDYE5A6NIY4 337 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 C2orf81A6NN90 581 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 CLASP2O75122 1294 aaKnown RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 VCPP55072 806 aaKnown RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 PTPN11Q06124 597 aaPredicted RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 POLD3Q15054 466 aaPredicted RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 SPDYE7PQ495Y7 208 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 DDX42Q86XP3 938 aaKnown RBP eCLIP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 GPC2Q8N158 579 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 FDXACB1Q9BRP7 624 aaPredicted RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 MRIQ9BWK5 157 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 CRLS1Q9UJA2 301 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 SLC4A7Q9Y6M7 1214 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 SLC29A2Q14542 456 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 AMHR2Q16671 573 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 LVRNQ6Q4G3 990 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 OR2W6PQ8NHA6 318 aa19.7■□□□□ 0.74
PTPRE-201ENST00000254667 PABPC3Q9H361 631 aaKnown RBP19.7■□□□□ 0.74
PTPRE-201ENST00000254667 C5orf58C9J3I9 102 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 SOAT2O75908 522 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 BST2Q10589 180 aaKnown RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 C6orf10Q5SRN2 563 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 C15orf52Q6ZUT6 534 aaKnown RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 RPAINQ86UA6 219 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 RARRES1P49788 294 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 KPNA1P52294 538 aaPredicted RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 WASHC5Q12768 1159 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 TMEM119Q4V9L6 283 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 ZNF280DQ6N043 979 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 PKN3Q6P5Z2 889 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 SV2AQ7L0J3 742 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 FAM172AQ8WUF8 416 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 PKD2L2Q9NZM6 624 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 WNT10BO00744 389 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 CDH2P19022 906 aaPredicted RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 CHRM3P20309 590 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 MANSC1Q9H8J5 431 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 KANSL3Q9P2N6 904 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 SRP72O76094 671 aaKnown RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 HDAC4P56524 1084 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 C1QBPQ07021 282 aaKnown RBP19.69■□□□□ 0.74
PTPRE-201ENST00000254667 CLEC16AQ2KHT3 1053 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 SNX31Q8N9S9 440 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 ADAM33Q9BZ11 813 aa19.69■□□□□ 0.74
PTPRE-201ENST00000254667 CHORDC1Q9UHD1 332 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms