RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 ACOT1Q86TX2 421 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 TRIM59Q8IWR1 403 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 TTC39CQ8N584 583 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 STKLD1Q8NE28 680 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 TASP1Q9H6P5 420 aa26.69■■□□□ 1.86
LSM7-201ENST00000252622 MAGED2Q9UNF1 606 aaPredicted RBP26.69■■□□□ 1.86
LSM7-201ENST00000252622 F11P03951 625 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 TRIM21P19474 475 aaKnown RBP26.68■■□□□ 1.86
LSM7-201ENST00000252622 WEE1P30291 646 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 CYP4F8P98187 520 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 GPR158Q5T848 1215 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 FAM35AQ86V20 835 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 E2F7Q96AV8 911 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 MED15Q96RN5 788 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 FBXL21Q9UKT6 434 aa26.68■■□□□ 1.86
LSM7-201ENST00000252622 SOBPA7XYQ1 873 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 F8VP50 259 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 P4HA2O15460 535 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 CILPO75339 1184 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 CCDC192P0DO97 292 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 DDX6P26196 483 aaKnown RBP eCLIP26.67■■□□□ 1.862e-15■□□□□ 9.7
LSM7-201ENST00000252622 DENND5BQ6ZUT9 1274 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 FBXL6Q8N531 539 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 TWNKQ96RR1 684 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 NT5C1AQ9BXI3 368 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 PLA2G2FQ9BZM2 168 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 DNAI2Q9GZS0 605 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 EHD2Q9NZN4 543 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 DACH1Q9UI36 760 aa26.67■■□□□ 1.86
LSM7-201ENST00000252622 CLDN5O00501 218 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 CFHP08603 1231 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 CD58P19256 250 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 CACNA2D1P54289 1103 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 GPC5P78333 572 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 ORC1Q13415 861 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 DPCR1Q3MIW9 517 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 PAQR9Q6ZVX9 377 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 FUKQ8N0W3 1084 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 WHAMMQ8TF30 809 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 DEPDC1BQ8WUY9 529 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 SMARCD1Q96GM5 515 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 MED10Q9BTT4 135 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 TTLL2Q9BWV7 592 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 TMEM30AQ9NV96 361 aa26.66■■□□□ 1.86
LSM7-201ENST00000252622 TADA3O75528 432 aa26.65■■□□□ 1.86
LSM7-201ENST00000252622 MBD3O95983 291 aa26.65■■□□□ 1.86
LSM7-201ENST00000252622 RBM43Q6ZSC3 357 aaKnown RBP26.65■■□□□ 1.86
LSM7-201ENST00000252622 ARID3BQ8IVW6 561 aaPredicted RBP26.65■■□□□ 1.86
LSM7-201ENST00000252622 SUGP1Q8IWZ8 645 aaKnown RBP26.65■■□□□ 1.86
LSM7-201ENST00000252622 MRPS31Q92665 395 aaKnown RBP26.65■■□□□ 1.86
LSM7-201ENST00000252622 TATDN2Q93075 761 aa26.65■■□□□ 1.86
LSM7-201ENST00000252622 NUP210Q8TEM1 1887 aaPredicted RBP26.64■■□□□ 1.86
LSM7-201ENST00000252622 PDGFBP01127 241 aaPredicted RBP26.64■■□□□ 1.86
LSM7-201ENST00000252622 CCDC130P13994 396 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 ERCC5P28715 1186 aaPredicted RBP26.64■■□□□ 1.86
LSM7-201ENST00000252622 VIPR2P41587 438 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 PFKPQ01813 784 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 CETN1Q12798 172 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 VITQ6UXI7 678 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 SIX5Q8N196 739 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 SLC2A14Q8TDB8 520 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 ARID3AQ99856 593 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 DMAP1Q9NPF5 467 aaPredicted RBP26.64■■□□□ 1.86
LSM7-201ENST00000252622 KRT82Q9NSB4 513 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 CISHQ9NSE2 258 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 OBP2AQ9NY56 170 aa26.64■■□□□ 1.86
LSM7-201ENST00000252622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.64■■□□□ 1.86
LSM7-201ENST00000252622 AFPP02771 609 aaKnown RBP26.63■■□□□ 1.85
LSM7-201ENST00000252622 PSMC3P17980 439 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 KCNH2Q12809 1159 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 CUL2Q13617 745 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 CT47A1Q5JQC4 288 aaPredicted RBP26.63■■□□□ 1.85
LSM7-201ENST00000252622 MON1AQ86VX9 555 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 MFSD6LQ8IWD5 586 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 C12orf29Q8N999 325 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 CNOT6LQ96LI5 555 aaKnown RBP26.63■■□□□ 1.85
LSM7-201ENST00000252622 HNRNPABQ99729 332 aaKnown RBP26.63■■□□□ 1.85
LSM7-201ENST00000252622 SLC46A2Q9BY10 475 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 ARHGEF3Q9NR81 526 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 FAM49BQ9NUQ9 324 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 OBSL1O75147 1896 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 GREB1Q4ZG55 1949 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 NCANO14594 1321 aa26.63■■□□□ 1.85
LSM7-201ENST00000252622 HEPACAM2A8MVW5 462 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 TBXAS1P24557 533 aaPredicted RBP26.62■■□□□ 1.85
LSM7-201ENST00000252622 USP46P62068 366 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 CMTM8Q8IZV2 173 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 RSPRY1Q96DX4 576 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 TRMT61BQ9BVS5 477 aaKnown RBP26.62■■□□□ 1.85
LSM7-201ENST00000252622 MFSD1Q9H3U5 465 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 CA14Q9ULX7 337 aa26.62■■□□□ 1.85
LSM7-201ENST00000252622 DENND4CQ5VZ89 1909 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 KRBA1A5PL33 1030 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 AP1G2O75843 785 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 PRAMEF12O95522 483 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 COL9A1P20849 921 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 YWHAEP62258 255 aaKnown RBP26.61■■□□□ 1.85
LSM7-201ENST00000252622 GRM2Q14416 872 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 TXNDC8Q6A555 127 aa26.61■■□□□ 1.85
LSM7-201ENST00000252622 NUP93Q8N1F7 819 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms