RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 EXD1Q8NHP7 514 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 JOSD2Q8TAC2 188 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 TTC25Q96NG3 672 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 DCLRE1BQ9H816 532 aa12.54□□□□□ -0.4
USHBP1-201ENST00000252597 CCDC78A2IDD5 438 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 PDE5AO76074 875 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 NCF2P19878 526 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 VHLP40337 213 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 RGS7P49802 495 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 NEK3P51956 506 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 CACNA2D1P54289 1103 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 C16orf46Q6P387 395 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 IZUMO2Q6UXV1 221 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 LAMB1P07942 1786 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 MCF2LO15068 1137 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 DHX15O43143 795 aaKnown RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 GCAP28676 217 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 VCPP55072 806 aaKnown RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 CDH6P55285 790 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 LRRC74BQ6ZQY2 392 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 LRRC71Q8N4P6 559 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 PYDC1Q8WXC3 89 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 FGD4Q96M96 766 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 NLRP4Q96MN2 994 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 BTBD10Q9BSF8 475 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
USHBP1-201ENST00000252597 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-201ENST00000252597 SLC26A4O43511 780 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 UGT1A9O60656 530 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 CCNB1P14635 433 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 CAP2P40123 477 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 MMP14P50281 582 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 AQP5P55064 265 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 IGBP1P78318 339 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 UBAP2LQ14157 1087 aaKnown RBP12.52□□□□□ -0.4
USHBP1-201ENST00000252597 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 MON1BQ7L1V2 547 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 ATP6V0A1Q93050 837 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 MMP19Q99542 508 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 CEP41Q9BYV8 373 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 UGT1A7Q9HAW7 530 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 UGT1A10Q9HAW8 530 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 UGT1A8Q9HAW9 530 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 IL1RAPL1Q9NZN1 696 aa12.52□□□□□ -0.4
USHBP1-201ENST00000252597 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 GSC2O15499 205 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 RNF8O76064 485 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 TMEM63AO94886 807 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 NR3C2P08235 984 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 ATP6V1C1P21283 382 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 GMPRP36959 345 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 CRADDP78560 199 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 KRT81Q14533 505 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 SNRNP48Q6IEG0 339 aaKnown RBP12.52□□□□□ -0.41
USHBP1-201ENST00000252597 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 NUDCD3Q8IVD9 361 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 HACE1Q8IYU2 909 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 TEX9Q8N6V9 391 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 SLC7A3Q8WY07 619 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.41
USHBP1-201ENST00000252597 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 KCNN4O15554 427 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 KLRC2P26717 231 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 MSX2P35548 267 aaPredicted RBP12.52□□□□□ -0.41
USHBP1-201ENST00000252597 PGM5Q15124 567 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 IGDCC3Q8IVU1 814 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 POLIQ9UNA4 740 aa12.52□□□□□ -0.41
USHBP1-201ENST00000252597 ZNF541Q9H0D2 1346 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 MTA2O94776 668 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 GJB1P08034 283 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 MRPS35P82673 323 aaKnown RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 SLC25A3Q00325 362 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 MOGSQ13724 837 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms