RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 TASP1Q9H6P5 420 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
VPREB3-201ENST00000248948 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 RWDD2AQ9UIY3 292 aa13.6□□□□□ -0.23
VPREB3-201ENST00000248948 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
VPREB3-201ENST00000248948 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 SLC38A8A6NNN8 435 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 TADA3O75528 432 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
VPREB3-201ENST00000248948 CFHP08603 1231 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 COL9A1P20849 921 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 BDNFP23560 247 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 CDR1P51861 262 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 NDST1P52848 882 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 CDH8P55286 799 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 GPR158Q5T848 1215 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 TMEM150AQ86TG1 271 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 SCN4BQ8IWT1 228 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 MLKLQ8NB16 471 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 GPR152Q8TDT2 470 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 ZSWIM3Q96MP5 696 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
VPREB3-201ENST00000248948 TTLL2Q9BWV7 592 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 OBP2AQ9NY56 170 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 HMGXB4Q9UGU5 601 aa13.59□□□□□ -0.23
VPREB3-201ENST00000248948 P4HA2O15460 535 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 CILPO75339 1184 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 F11P03951 625 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 PFKLP17858 780 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 PSMC3P17980 439 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 GRIK1P39086 918 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 FMO5P49326 533 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 NUBP1P53384 320 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 CYP4F8P98187 520 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 CWF19L1Q69YN2 538 aaKnown RBP13.58□□□□□ -0.24
VPREB3-201ENST00000248948 TANGO2Q6ICL3 276 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 VITQ6UXI7 678 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 SIX5Q8N196 739 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
VPREB3-201ENST00000248948 SEMA4DQ92854 862 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 B3GNT5Q9BYG0 378 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 KIF9Q9HAQ2 790 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
VPREB3-201ENST00000248948 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 DACH1Q9UI36 760 aa13.58□□□□□ -0.24
VPREB3-201ENST00000248948 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
VPREB3-201ENST00000248948 F8VP50 259 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
VPREB3-201ENST00000248948 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PPP3CCP48454 512 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PDE6CP51160 858 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 CLCN5P51795 746 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 GPC5P78333 572 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PRKCQQ04759 706 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 CETN1Q12798 172 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 PRRX2Q99811 253 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
VPREB3-201ENST00000248948 KRT82Q9NSB4 513 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 NCANO14594 1321 aa13.57□□□□□ -0.24
VPREB3-201ENST00000248948 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 HEPACAM2A8MVW5 462 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 RTN3O95197 1032 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 AOC1P19801 751 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 AVPR1AP37288 418 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 STX17P56962 302 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 CUL2Q13617 745 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 ZNF268Q14587 947 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 MON1AQ86VX9 555 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 ARID3BQ8IVW6 561 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
VPREB3-201ENST00000248948 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 OVCA2Q8WZ82 227 aa13.56□□□□□ -0.24
VPREB3-201ENST00000248948 IRF7Q92985 503 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms