RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 FBXO46Q6PJ61 603 aaPredicted RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 DPH6Q7L8W6 267 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 TTC39CQ8N584 583 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 NIPA2Q8N8Q9 360 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 C1orf54Q8WWF1 131 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 KIAA0100Q14667 2235 aaKnown RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 ZNF623O75123 536 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 PFKMP08237 780 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 RALAP11233 206 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 SSR1P43307 286 aaKnown RBP24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 GABRB2P47870 512 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 HSP90B2PQ58FF3 399 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 TXNRD3NBQ6F5E7 133 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 LCLAT1Q6UWP7 414 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 SLC39A5Q6ZMH5 540 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 ECHDC2Q86YB7 292 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 IQCKQ8N0W5 287 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 RSAD1Q9HA92 442 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 CHST7Q9NS84 486 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 KLHL11Q9NVR0 708 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 TSPAN16Q9UKR8 245 aa24.62■■□□□ 1.53
SYNGR3-201ENST00000248121 KRT3P12035 628 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 FNTAP49354 379 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 SOWAHAQ2M3V2 549 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 TRIM60Q495X7 471 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 ZNF598Q86UK7 904 aaKnown RBP24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 EXD1Q8NHP7 514 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 SCLYQ96I15 445 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 GIT1Q9Y2X7 761 aa24.61■■□□□ 1.53
SYNGR3-201ENST00000248121 POMCP01189 267 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 PIGHQ14442 188 aaPredicted RBP24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ARFGAP1Q8N6T3 406 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 C3orf58Q8NDZ4 430 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ATG4AQ8WYN0 398 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ZIM3Q96PE6 472 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 HEMGNQ9BXL5 484 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ZDHHC18Q9NUE0 388 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 KIAA1257Q9ULG3 409 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 INPP5FQ9Y2H2 1132 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 R3HDM2Q9Y2K5 976 aaKnown RBP24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 RAB27AP51159 221 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 DRG2P55039 364 aaKnown RBP24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ZNF268Q14587 947 aaPredicted RBP24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ALS2CLQ60I27 953 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 ACOT1Q86TX2 421 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 CCDC50Q8IVM0 306 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 MCRS1Q96EZ8 462 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 SH3GL2Q99962 352 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 LPIN3Q9BQK8 851 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 RGS18Q9NS28 235 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 VPS18Q9P253 973 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 LCMT1Q9UIC8 334 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 SNX24Q9Y343 169 aa24.6■■□□□ 1.53
SYNGR3-201ENST00000248121 CASTOR2A6NHX0 329 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 C9IYK1 514 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 THP07101 528 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 FGFR1P11362 822 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 LRPAP1P30533 357 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 CLCNKBP51801 687 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 PPP1R26Q5T8A7 1209 aaPredicted RBP24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 LRRC38Q5VT99 294 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 CCDC105Q8IYK2 499 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 KBTBD7Q8WVZ9 684 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 RNF25Q96BH1 459 aaPredicted RBP24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 OSBPL8Q9BZF1 889 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 METTL5Q9NRN9 209 aaKnown RBP24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 GRHL1Q9NZI5 618 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 WDR35Q9P2L0 1181 aa24.59■■□□□ 1.53
SYNGR3-201ENST00000248121 KPNA7A9QM74 516 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 XPOTO43592 962 aaKnown RBP24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 RNF40O75150 1001 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 FAAP100Q0VG06 881 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 PKDCCQ504Y2 493 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 ZDHHC24Q6UX98 284 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 HACE1Q8IYU2 909 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 EMC1Q8N766 993 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 PPP1R12CQ9BZL4 782 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 DCLK3Q9C098 648 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 TSPYL2Q9H2G4 693 aaPredicted RBP24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 SYNCQ9H7C4 482 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 RASAL2Q9UJF2 1139 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 PI4K2BG5E9Z4 385 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 RPL21P46778 160 aaKnown RBP24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 TAF6P49848 677 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 CCL23P55773 120 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 LILRA4P59901 499 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 ADCY2Q08462 1091 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 UAP1Q16222 522 aaPredicted RBP24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 GOLGA7BQ2TAP0 167 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 DBF4BQ8NFT6 615 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 FNIP1Q8TF40 1166 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 SLCO2A1Q92959 643 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 ARMC5Q96C12 935 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 DPEP3Q9H4B8 488 aa24.58■■□□□ 1.53
SYNGR3-201ENST00000248121 PODXLO00592 558 aa24.57■■□□□ 1.52
SYNGR3-201ENST00000248121 B4GALT3O60512 393 aa24.57■■□□□ 1.52
SYNGR3-201ENST00000248121 HSF2BPO75031 334 aa24.57■■□□□ 1.52
SYNGR3-201ENST00000248121 COL6A1P12109 1028 aa24.57■■□□□ 1.52
SYNGR3-201ENST00000248121 PSMA2P25787 234 aa24.57■■□□□ 1.52
SYNGR3-201ENST00000248121 TLE2Q04725 743 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms