RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ADCYAP1R1P41586 468 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 ARSEP51690 589 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 ORC1Q13415 861 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 HADHQ16836 314 aaKnown RBP23.02■■□□□ 1.28
RNF39-201ENST00000244360 VSTM1Q6UX27 236 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 NT5DC4Q86YG4 428 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 HPDLQ96IR7 371 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 RBM15Q96T37 977 aaKnown RBP eCLIP23.02■■□□□ 1.28
RNF39-201ENST00000244360 PPP1R16BQ96T49 567 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 MYCBPQ99417 103 aaPredicted RBP23.02■■□□□ 1.28
RNF39-201ENST00000244360 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 UNCXA6NJT0 531 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 NDC80O14777 642 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 STRNO43815 780 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 MAP2K2P36507 400 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 GPD2P43304 727 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 MAGEA4P43358 317 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 ELF3P78545 371 aaPredicted RBP23.02■■□□□ 1.28
RNF39-201ENST00000244360 STAT4Q14765 748 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 MORF4L2Q15014 288 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 BBS12Q6ZW61 710 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 METTL5Q9NRN9 209 aaKnown RBP23.02■■□□□ 1.28
RNF39-201ENST00000244360 EURLQ9NYK6 297 aa23.02■■□□□ 1.28
RNF39-201ENST00000244360 A0A1B0GUA9 196 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 PDHXO00330 501 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 SNAI1O95863 264 aaPredicted RBP23.01■■□□□ 1.27
RNF39-201ENST00000244360 ZSCAN5DPP0CG00 497 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 ACAP1Q15027 740 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 RIBC1Q8N443 379 aaPredicted RBP23.01■■□□□ 1.27
RNF39-201ENST00000244360 CKAP2Q8WWK9 683 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 BARX2Q9UMQ3 279 aaPredicted RBP23.01■■□□□ 1.27
RNF39-201ENST00000244360 H3BRB1 525 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 CDH16O75309 829 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 MARCH8Q5T0T0 291 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 ARHGEF18Q6ZSZ5 1173 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 TTC39CQ8N584 583 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 MS4A4AQ96JQ5 239 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 C9orf72Q96LT7 481 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 TUT1Q9H6E5 874 aaKnown RBP23.01■■□□□ 1.27
RNF39-201ENST00000244360 SYNCQ9H7C4 482 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 CTNNAL1Q9UBT7 734 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 AGAP1Q9UPQ3 857 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 SHOC2Q9UQ13 582 aa23.01■■□□□ 1.27
RNF39-201ENST00000244360 M0QYV0 167 aa23■■□□□ 1.27
RNF39-201ENST00000244360 KDELR1P24390 212 aa23■■□□□ 1.27
RNF39-201ENST00000244360 RBP5P82980 135 aa23■■□□□ 1.27
RNF39-201ENST00000244360 GPS1Q13098 491 aa23■■□□□ 1.27
RNF39-201ENST00000244360 RIPK1Q13546 671 aa23■■□□□ 1.27
RNF39-201ENST00000244360 RNASEH2BQ5TBB1 312 aaKnown RBP23■■□□□ 1.27
RNF39-201ENST00000244360 TTC13Q8NBP0 860 aa23■■□□□ 1.27
RNF39-201ENST00000244360 NLRP7Q8WX94 980 aa23■■□□□ 1.27
RNF39-201ENST00000244360 ZWILCHQ9H900 591 aa23■■□□□ 1.27
RNF39-201ENST00000244360 C11orf97A0A1B0GVM6 126 aaPredicted RBP23■■□□□ 1.27
RNF39-201ENST00000244360 TCP11X1B4DZS4 312 aa23■■□□□ 1.27
RNF39-201ENST00000244360 CETPP11597 493 aa23■■□□□ 1.27
RNF39-201ENST00000244360 ETS1P14921 441 aa23■■□□□ 1.27
RNF39-201ENST00000244360 ZNF410Q86VK4 478 aa23■■□□□ 1.27
RNF39-201ENST00000244360 EMC1Q8N766 993 aa23■■□□□ 1.27
RNF39-201ENST00000244360 HAUS1Q96CS2 278 aa23■■□□□ 1.27
RNF39-201ENST00000244360 TTC25Q96NG3 672 aa23■■□□□ 1.27
RNF39-201ENST00000244360 ACAP3Q96P50 834 aa23■■□□□ 1.27
RNF39-201ENST00000244360 DPP3Q9NY33 737 aa23■■□□□ 1.27
RNF39-201ENST00000244360 BRAFP15056 766 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 PECAM1P16284 738 aaPredicted RBP22.99■■□□□ 1.27
RNF39-201ENST00000244360 GRM5P41594 1212 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 GRIK4Q16099 956 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 SMTNL2Q2TAL5 461 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 MAP1SQ66K74 1059 aaPredicted RBP22.99■■□□□ 1.27
RNF39-201ENST00000244360 CMASQ8NFW8 434 aaPredicted RBP22.99■■□□□ 1.27
RNF39-201ENST00000244360 KCNK9Q9NPC2 374 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 KIAA1257Q9ULG3 409 aa22.99■■□□□ 1.27
RNF39-201ENST00000244360 BTBD19C9JJ37 291 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 EZRP15311 586 aaKnown RBP22.98■■□□□ 1.27
RNF39-201ENST00000244360 GCLCP48506 637 aaPredicted RBP22.98■■□□□ 1.27
RNF39-201ENST00000244360 PPP1R21Q6ZMI0 780 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 MGARPQ8TDB4 240 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 UPF1Q92900 1129 aaKnown RBP eCLIP22.98■■□□□ 1.27
RNF39-201ENST00000244360 HEXIM2Q96MH2 286 aaKnown RBP22.98■■□□□ 1.27
RNF39-201ENST00000244360 CFAP57Q96MR6 1250 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 TMEM121Q9BTD3 319 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 SAYSD1Q9NPB0 183 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 FGFR1OP2Q9NVK5 253 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 NKIRAS1Q9NYS0 192 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 ARL2BPQ9Y2Y0 163 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 ATP6V1G2O95670 118 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 CYP3A5P20815 502 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 NDST1P52848 882 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 MYO1EQ12965 1108 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 NR1H3Q13133 447 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 LRRC14Q15048 493 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 NUGGCQ68CJ6 796 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 CHADLQ6NUI6 762 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 LCLAT1Q6UWP7 414 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 FAM228AQ86W67 206 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 ACTL9Q8TC94 416 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 MAGEB18Q96M61 343 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 ADPGKQ9BRR6 497 aa22.98■■□□□ 1.27
RNF39-201ENST00000244360 CST8O60676 142 aa22.97■■□□□ 1.27
RNF39-201ENST00000244360 MMP3P08254 477 aa22.97■■□□□ 1.27
RNF39-201ENST00000244360 CREB1P16220 341 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms