RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SENP1Q9P0U3 644 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 PSMC3IPQ9P2W1 217 aaPredicted RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 RBPJLQ9UBG7 517 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SMG5Q9UPR3 1016 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 STARD13Q9Y3M8 1113 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 MCM3APO60318 1980 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 NDC80O14777 642 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 B4GALT5O43286 388 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KRT7P08729 469 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KRT16P08779 473 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 PROZP22891 400 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KDELR1P24390 212 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SSTR1P30872 391 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SLC18A1P54219 525 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CDH8P55286 799 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 PSMC1P62191 440 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 TTLL12Q14166 644 aaPredicted RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 EFTUD2Q15029 972 aaKnown RBP eCLIP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SLC1A5Q15758 541 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 HSDL1Q3SXM5 330 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 MSS51Q4VC12 460 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 FNBP1LQ5T0N5 605 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 PCGF5Q86SE9 256 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 PPIL6Q8IXY8 311 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 TAB3Q8N5C8 712 aaPredicted RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 CPXM1Q96SM3 734 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 ARHGEF3Q9NR81 526 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 METTL5Q9NRN9 209 aaKnown RBP15.1■□□□□ 0.01
HIF3A-202ENST00000244303 SLC24A2Q9UI40 661 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 KCNH4Q9UQ05 1017 aa15.1■□□□□ 0.01
HIF3A-202ENST00000244303 B4GALT4O60513 344 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 GBP2P32456 591 aaPredicted RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 CCDC15Q0P6D6 951 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TFDP1Q14186 410 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 HADHQ16836 314 aaKnown RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 EFHC2Q5JST6 749 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 ATF7IP2Q5U623 682 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 EEF1DP3Q658K8 133 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 BBS12Q6ZW61 710 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 ASRGL1Q7L266 308 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TMEM192Q8IY95 271 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TRAPPC12Q8WVT3 735 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 NLRP4Q96MN2 994 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 MAK16Q9BXY0 300 aaKnown RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 C2orf40Q9H1Z8 148 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 LHX5Q9H2C1 402 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PTPRHQ9HD43 1115 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 RABGEF1Q9UJ41 708 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 EFR3BQ9Y2G0 817 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 IGKV6-21A0A0C4DH24 114 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 INO80B-WBP1J3KQ70 363 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 MED7O43513 233 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TYROBPO43914 113 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PIAS1O75925 651 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 ERBB2P04626 1255 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 RPSAP08865 295 aaKnown RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 CXCL8P10145 99 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 GEMIN4P57678 1058 aaKnown RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 MTM1Q13496 603 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PDK4Q16654 411 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 XYLT1Q86Y38 959 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 NAT8LQ8N9F0 302 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 FNIP1Q8TF40 1166 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PYROXD1Q8WU10 500 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 RSAD2Q8WXG1 361 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 MPHOSPH6Q99547 160 aaKnown RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 GPR20Q99678 358 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 INO80BQ9C086 356 aaPredicted RBP15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 STK38LQ9Y2H1 464 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 PPME1Q9Y570 386 aa15.09■□□□□ 0.01
HIF3A-202ENST00000244303 A8MUI8 341 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 ACKR2O00590 384 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 GAS2O43903 313 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 ALADP13716 330 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 CCNB1P14635 433 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 RPL22P35268 128 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 CLNS1AP54105 237 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 RAD23BP54727 409 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 ARL4CP56559 192 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 PPIL2Q13356 520 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 MOGSQ13724 837 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 RASA2Q15283 850 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 CELF3Q5SZQ8 465 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 RGS9BPQ6ZS82 235 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 UNC45BQ8IWX7 931 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 TTC13Q8NBP0 860 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 ZBTB10Q96DT7 871 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 WDR83Q9BRX9 315 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 SDCBP2Q9H190 292 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 MYLK2Q9H1R3 596 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 SYNCQ9H7C4 482 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 PPCSQ9HAB8 311 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 SPON1Q9HCB6 807 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 TCRBV7S3A2A0A539 114 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 NOP56O00567 594 aaKnown RBP15.08■□□□□ 0
HIF3A-202ENST00000244303 LGR5O75473 907 aa15.08■□□□□ 0
HIF3A-202ENST00000244303 KRT4P19013 534 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms