RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ZNFX1Q9P2E3 1918 aaKnown RBP20.81■□□□□ 0.92
HOXC13-201ENST00000243056 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 C2CD2LO14523 706 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 NFKBIAP25963 317 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 THOC7Q6I9Y2 204 aaKnown RBP20.81■□□□□ 0.92
HOXC13-201ENST00000243056 EPM2AIP1Q7L775 607 aaPredicted RBP20.81■□□□□ 0.92
HOXC13-201ENST00000243056 GPR142Q7Z601 462 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 CCDC65Q8IXS2 484 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 NDE1Q9NXR1 346 aa20.81■□□□□ 0.92
HOXC13-201ENST00000243056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.8■□□□□ 0.92
HOXC13-201ENST00000243056 CFAP69A5D8W1 941 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 SPATA31C2B4DYI2 1134 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 SPAG7O75391 227 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 MUTP22033 750 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 EPHA7Q15375 998 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 C3orf62Q6ZUJ4 267 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 GPRASP2Q96D09 838 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 SNX27Q96L92 541 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 HNRNPABQ99729 332 aaKnown RBP20.8■□□□□ 0.92
HOXC13-201ENST00000243056 RBM38Q9H0Z9 239 aaKnown RBP20.8■□□□□ 0.92
HOXC13-201ENST00000243056 TAS2R1Q9NYW7 299 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 ITGB1BP2Q9UKP3 347 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 CCDC160A6NGH7 325 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 FAM47DPA6NHR8 397 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 A8MXQ7 604 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 ZWINTO95229 277 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 ACTN1P12814 892 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 CHKAP35790 457 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 PDE1BQ01064 536 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 LRRC63Q05C16 580 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 KYNUQ16719 465 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 PLA2G4FQ68DD2 849 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 PDSS2Q86YH6 399 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 METTL25Q8N6Q8 603 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 ALG3Q92685 438 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 TTC1Q99614 292 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 NPHS2Q9NP85 383 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 TBC1D22BQ9NU19 505 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 CROTQ9UKG9 612 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 PPM1HQ9ULR3 514 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 NAALADL1Q9UQQ1 740 aa20.8■□□□□ 0.92
HOXC13-201ENST00000243056 A0A0A6YYK5 440 aaPredicted RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 E9PBE3 544 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 TOMM70O94826 608 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 KRT18P05783 430 aaKnown RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 H2AFZP0C0S5 128 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 UBA1P22314 1058 aaKnown RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 EDNRBP24530 442 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 NPEPPSP55786 919 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 AMPD3Q01432 767 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 SWSAP1Q6NVH7 229 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 H2AFVQ71UI9 128 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 OTOAQ7RTW8 1153 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 PRUNE1Q86TP1 453 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 BBS5Q8N3I7 341 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 OR6Y1Q8NGX8 325 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 U2AF1L4Q8WU68 220 aaKnown RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 REEP2Q9BRK0 252 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 MAGEF1Q9HAY2 307 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 HESX1Q9UBX0 185 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 TCEAL9Q9UHQ7 104 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 SLC45A1Q9Y2W3 748 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 MANSC4A6NHS7 340 aaPredicted RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 HAUS5O94927 633 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 BAG2O95816 211 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 FGFR1P11362 822 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 CRHR2Q13324 411 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 MSLNQ13421 630 aaPredicted RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 MED21Q13503 144 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 BCL2A1Q16548 175 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 SFT2D3Q587I9 215 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 JPH1Q9HDC5 661 aaPredicted RBP20.79■□□□□ 0.92
HOXC13-201ENST00000243056 MORF4L1Q9UBU8 362 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 PCYOX1Q9UHG3 505 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 LGALS13Q9UHV8 139 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 COL4A3BPQ9Y5P4 624 aa20.79■□□□□ 0.92
HOXC13-201ENST00000243056 PODXLO00592 558 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 TP73O15350 636 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 GAS8O95995 478 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 PDGFRBP09619 1106 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 CHRNA3P32297 505 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 RXRGP48443 463 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 CCNA1P78396 465 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 RGS9BPQ6ZS82 235 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 CCDC60Q8IWA6 550 aaPredicted RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 GUF1Q8N442 669 aaKnown RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 ZNF784Q8NCA9 323 aaPredicted RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 PRPF31Q8WWY3 499 aaKnown RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 IVNS1ABPQ9Y6Y0 642 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 FAM170AA1A519 330 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 TFAP2AP05549 437 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 RELAQ04206 551 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 NADK2Q4G0N4 442 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 SMUG1Q53HV7 270 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 PATL1Q86TB9 770 aaKnown RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 DPP9Q86TI2 863 aa20.78■□□□□ 0.92
HOXC13-201ENST00000243056 SYT2Q8N9I0 419 aaPredicted RBP20.78■□□□□ 0.92
HOXC13-201ENST00000243056 NSL1Q96IY1 281 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms