RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CPSF2Q9P2I0 782 aaKnown RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 ARHGAP28Q9P2N2 729 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 MYH9P35579 1960 aaKnown RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 FAM237BA0A1B0GVD1 139 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 MAGEA13PA6NCF6 341 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 E5RJQ4 531 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 MAP3K7O43318 606 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 GHRHRQ02643 423 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 SCARA3Q6AZY7 606 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 RFX8Q6ZV50 586 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 APOPT1Q96IL0 206 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 TRAPPC9Q96Q05 1148 aa16.25■□□□□ 0.19
DDX55-201ENST00000238146 ZNF184Q99676 751 aaPredicted RBP16.25■□□□□ 0.19
DDX55-201ENST00000238146 KDM4FA0A1W2PPD8 638 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 CLRN2A0PK11 232 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 A8MXQ7 604 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 STBD1O95210 358 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 CALB1P05937 261 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 CPA2P48052 419 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 RAP1GDS1P52306 607 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 SLC18A2Q05940 514 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 PTK7Q13308 1070 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 FAM91A1Q658Y4 838 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 IGDCC3Q8IVU1 814 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 PDIK1LQ8N165 341 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 CYTH2Q99418 400 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 PDLIM7Q9NR12 457 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 GABBR1Q9UBS5 961 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 IL1BP01584 269 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 TBXAS1P24557 533 aaPredicted RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 HAPLN2Q9GZV7 340 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 XPO7Q9UIA9 1087 aaKnown RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 STRIP2Q9ULQ0 834 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 CHMP2BQ9UQN3 213 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 PCDHA10Q9Y5I2 948 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 RGPD3A6NKT7 1758 aaPredicted RBP16.24■□□□□ 0.19
DDX55-201ENST00000238146 RGPD4Q7Z3J3 1758 aa16.24■□□□□ 0.19
DDX55-201ENST00000238146 IQANK1A0A1B0GTG1 560 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 TESPA1A2RU30 521 aaPredicted RBP16.23■□□□□ 0.19
DDX55-201ENST00000238146 B2RBV5 119 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 CST8O60676 142 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 PYGBP11216 843 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 SERPINB4P48594 390 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 ZNF132P52740 706 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 CCNJLQ8IV13 435 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 FBXO27Q8NI29 283 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 MAGEC1O60732 1142 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 POLE2P56282 527 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 HSF5Q4G112 596 aaPredicted RBP16.23■□□□□ 0.19
DDX55-201ENST00000238146 ZBTB41Q5SVQ8 909 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 TREML1Q86YW5 311 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 UNC45BQ8IWX7 931 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 ARHGAP24Q8N264 748 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 RSAD2Q8WXG1 361 aa16.23■□□□□ 0.19
DDX55-201ENST00000238146 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
DDX55-201ENST00000238146 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
DDX55-201ENST00000238146 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
DDX55-201ENST00000238146 TCRBV9S1A1TA0A576 114 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 SMAPO00193 183 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 RTP1P59025 263 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 SMTNL2Q2TAL5 461 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 KBTBD12Q3ZCT8 623 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 NIPA2Q8N8Q9 360 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 MCPH1Q8NEM0 835 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 CCDC110Q8TBZ0 833 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 SLC44A1Q8WWI5 657 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 FGD4Q96M96 766 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 PDCD2LQ9BRP1 358 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 STYXL1Q9Y6J8 313 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ZNF646O15015 1829 aaPredicted RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 CAPN14A8MX76 684 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 F8W8V4 182 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 H3BRJ5 948 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 DGAT1O75907 488 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 RTN3O95197 1032 aaPredicted RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 TSHRP16473 764 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 ELK3P41970 407 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 BBS12Q6ZW61 710 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 RMDN3Q96TC7 470 aa16.22■□□□□ 0.19
DDX55-201ENST00000238146 POLR3FQ9H1D9 316 aaPredicted RBP16.22■□□□□ 0.19
DDX55-201ENST00000238146 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms