RNA–Protein interactions for RNA: ENST00000229379.2

COX6A1-201, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX6A1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-201ENST00000229379 CSH2P0DML3 217 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 ORC1Q13415 861 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 SURF1Q15526 300 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 C12orf56Q8IXR9 622 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 ARL14EPQ8N8R7 260 aaPredicted RBP17.02■□□□□ 0.32
COX6A1-201ENST00000229379 OR6B3Q8NGW1 331 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 GCNAQ96QF7 691 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
COX6A1-201ENST00000229379 EXOC1Q9NV70 894 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
COX6A1-201ENST00000229379 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 FGF19O95750 216 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 C4BPAP04003 597 aaKnown RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 PCSK1P29120 753 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 GNL1P36915 607 aaPredicted RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 CFAP221Q4G0U5 840 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 HS2ST1Q7LGA3 356 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 KIAA2013Q8IYS2 634 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 PARD3BQ8TEW8 1205 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 NELL1Q92832 810 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 NELL2Q99435 816 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 ZNF518BQ9C0D4 1074 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 FBXO4Q9UKT5 387 aa17.01■□□□□ 0.31
COX6A1-201ENST00000229379 MRPS17Q9Y2R5 130 aaKnown RBP17.01■□□□□ 0.31
COX6A1-201ENST00000229379 F8VP50 259 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 WEE1P30291 646 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 GRIK1P39086 918 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
COX6A1-201ENST00000229379 KRT85P78386 507 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 LPAL2Q16609 132 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 ARHGAP29Q52LW3 1261 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 DPH6Q7L8W6 267 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 MON1AQ86VX9 555 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 SMYD4Q8IYR2 804 aaPredicted RBP17■□□□□ 0.31
COX6A1-201ENST00000229379 CELF5Q8N6W0 485 aaKnown RBP17■□□□□ 0.31
COX6A1-201ENST00000229379 MYRFLQ96LU7 910 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 SNX25Q9H3E2 840 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 TDP1Q9NUW8 608 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 OBP2AQ9NY56 170 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 GCNT4Q9P109 453 aa17■□□□□ 0.31
COX6A1-201ENST00000229379 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 NCAM2O15394 837 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 NR3C1P04150 777 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 PTPN1P18031 435 aaKnown RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 AVPR1AP37288 418 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 MAGEA11P43364 429 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 SYKP43405 635 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 DPYDQ12882 1025 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 MYCBPAPQ8TBZ2 947 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 MRPS31Q92665 395 aaKnown RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 EEF2KMTQ96G04 330 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 TRMT2BQ96GJ1 504 aaKnown RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 LINC00597Q9H2U6 94 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
COX6A1-201ENST00000229379 WNT6Q9Y6F9 365 aa16.99■□□□□ 0.31
COX6A1-201ENST00000229379 CEP250Q9BV73 2442 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 LILRB5O75023 590 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 PHACTR2O75167 634 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 TACC1O75410 805 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 TRIM49P0CI25 452 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 TRIM49CP0CI26 452 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 MAGEA9P43362 315 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 PGFP49763 221 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 TNNC1P63316 161 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 BIRC3Q13489 604 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 TRPC3Q13507 836 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 RUNX3Q13761 415 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 NCOA4Q13772 614 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 CCINQ13939 588 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 ZNF77Q15935 545 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 HEATR6Q6AI08 1181 aaKnown RBP16.98■□□□□ 0.31
COX6A1-201ENST00000229379 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 SPATA18Q8TC71 538 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
COX6A1-201ENST00000229379 FUBP3Q96I24 572 aaKnown RBP eCLIP16.98■□□□□ 0.31
COX6A1-201ENST00000229379 KCNK16Q96T55 309 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 RNF38Q9H0F5 515 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 C8orf33Q9H7E9 229 aaPredicted RBP16.98■□□□□ 0.31
COX6A1-201ENST00000229379 ZSCAN32Q9NX65 697 aa16.98■□□□□ 0.31
COX6A1-201ENST00000229379 CHURC1-FNTBB4DL54 471 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms