RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TMA16Q96EY4 203 aaKnown RBP10.96□□□□□ -0.66
TRPS1-201ENST00000220888 CYFIP2Q96F07 1278 aa10.96□□□□□ -0.66
TRPS1-201ENST00000220888 GAS2L1Q99501 681 aaPredicted RBP10.96□□□□□ -0.66
TRPS1-201ENST00000220888 TRABDQ9H4I3 376 aa10.96□□□□□ -0.66
TRPS1-201ENST00000220888 TAF1DQ9H5J8 278 aaPredicted RBP10.96□□□□□ -0.66
TRPS1-201ENST00000220888 A0A1W2PQC6 194 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TBC1D4O60343 1298 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SLC44A2Q8IWA5 706 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 MCOLN3Q8TDD5 553 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TMEM245Q9H330 911 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 PCMTD2Q9NV79 361 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 AAR2Q9Y312 384 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 A0A087WZ62 844 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 GPR75-ASB3A0A0A6YYF3 556 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SMAPO00193 183 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CXCL11O14625 94 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CYTH3O43739 400 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CYP11B2P19099 503 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ALDH18A1P54886 795 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 DEFB115Q30KQ5 88 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ACOT1Q86TX2 421 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CEP70Q8NHQ1 597 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 INPP5DQ92835 1189 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 OSBPL6Q9BZF3 934 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 USE1Q9NZ43 259 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CST8O60676 142 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 MSCO60682 206 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CRTAMO95727 393 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 HOXC6P09630 235 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 YWHAZP63104 245 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 MRPS15P82914 257 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RUNX1T1Q06455 604 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 BYSLQ13895 437 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TRMT11Q7Z4G4 463 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SUSD6Q92537 303 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 DNAJC1Q96KC8 554 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 C16orf96A6NNT2 1141 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 H3BRB1 525 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CYP7B1O75881 506 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 NTSR2O95665 410 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 HIC1Q14526 733 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TOMM20Q15388 145 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 AASDHQ4L235 1098 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 FAM171A1Q5VUB5 890 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 EXD1Q8NHP7 514 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ANKRD49Q8WVL7 239 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.663e-7■■■■■ 28.6
TRPS1-201ENST00000220888 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RNF112Q9ULX5 631 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 TBX20Q9UMR3 447 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 MRFAP1Q9Y605 127 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 POMCP01189 267 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RBP3P10745 1247 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 GHRP10912 638 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 MSH3P20585 1137 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RPA1P27694 616 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SERPINB10P48595 397 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 RPS7P62081 194 aaKnown RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SMTNL2Q2TAL5 461 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 OVOS1Q6IE37 1185 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CATSPER1Q8NEC5 780 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 SLC35G2Q8TBE7 412 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 OSMRQ99650 979 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ARMC7Q9H6L4 198 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
TRPS1-201ENST00000220888 ENO3P13929 434 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 NEK2P51955 445 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 BCAT1P54687 386 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 TAF2Q6P1X5 1199 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 SAMD3Q8N6K7 520 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 EXOSC4Q9NPD3 245 aaKnown RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 CHMP2BQ9UQN3 213 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 AKAP10O43572 662 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 MTA2O94776 668 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 SEC24DO94855 1032 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 VDRP11473 427 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 FDFT1P37268 417 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 NAMPTP43490 491 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 RENBPP51606 427 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 INHBEP58166 350 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 MTA1Q13330 715 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 LRRC14Q15048 493 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 FBXO33Q7Z6M2 555 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 GRAMD1AQ96CP6 724 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 PI4K2AQ9BTU6 479 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 NEU2Q9Y3R4 380 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 MGAT4DA6NG13 374 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms