RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TRIM65Q6PJ69 517 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 ATP8B4Q8TF62 1192 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 HMX1Q9NP08 348 aaPredicted RBP19.68■□□□□ 0.74
SMPD3-201ENST00000219334 CACNA2D2Q9NY47 1150 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 CLTCQ00610 1675 aaKnown RBP19.68■□□□□ 0.74
SMPD3-201ENST00000219334 CEMIPQ8WUJ3 1361 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 KDSRQ06136 332 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 TTC39BQ5VTQ0 682 aaPredicted RBP19.68■□□□□ 0.74
SMPD3-201ENST00000219334 SCUBE2Q9NQ36 999 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 VWA5AO00534 786 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 IL1R1P14778 569 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 PTPN7P35236 360 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 NCALDP61601 193 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 MFSD4BQ5TF39 518 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 SPATA21Q7Z572 469 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 SLFN11Q7Z7L1 901 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 ABHD16BQ9H3Z7 469 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 CDYLQ9Y232 598 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 SRP72O76094 671 aaKnown RBP19.68■□□□□ 0.74
SMPD3-201ENST00000219334 INSRRP14616 1297 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 DAB2P98082 770 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 GRIK4Q16099 956 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 TJAP1Q5JTD0 557 aa19.68■□□□□ 0.74
SMPD3-201ENST00000219334 TCP11X1B4DZS4 312 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 STARD3Q14849 445 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 TAF2Q6P1X5 1199 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 B4GALNT2Q8NHY0 566 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 TMA16Q96EY4 203 aaKnown RBP19.67■□□□□ 0.74
SMPD3-201ENST00000219334 SGSM3Q96HU1 749 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 ZFP42Q96MM3 310 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 AGO4Q9HCK5 861 aaKnown RBP19.67■□□□□ 0.74
SMPD3-201ENST00000219334 CASTOR2A6NHX0 329 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 HDAC4P56524 1084 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 RHOAP61586 193 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 ZBTB17Q13105 803 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 PHF21AQ96BD5 680 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 CDK5RAP1Q96SZ6 601 aaKnown RBP19.67■□□□□ 0.74
SMPD3-201ENST00000219334 THG1LQ9NWX6 298 aaKnown RBP19.67■□□□□ 0.74
SMPD3-201ENST00000219334 EVPLLA8MZ36 301 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 HOXC6P09630 235 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 CKBP12277 381 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 PGM1P36871 562 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 Q4G0T1 1027 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 CYP3A43Q9HB55 503 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 VTA1Q9NP79 307 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 E2F8A0AVK6 867 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 CARSP49589 748 aaKnown RBP19.67■□□□□ 0.74
SMPD3-201ENST00000219334 MAP3K7CLP57077 242 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 PDK2Q15119 407 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 IFNEQ86WN2 208 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 DNAJC7Q99615 494 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 DIP2AQ14689 1571 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 ABCA6Q8N139 1617 aa19.67■□□□□ 0.74
SMPD3-201ENST00000219334 ENO1P06733 434 aaKnown RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 KLRC2P26717 231 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 LAMTOR4Q0VGL1 99 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 FBXO47Q5MNV8 452 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 WDR49Q8IV35 697 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 ZNF518BQ9C0D4 1074 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 H2AFY2Q9P0M6 372 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 HPS5Q9UPZ3 1129 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 AMHP03971 560 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 APOA4P06727 396 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 ENO3P13929 434 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 TGM2P21980 687 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 ITGA8P53708 1063 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 CLEC16AQ2KHT3 1053 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 ERGIC2Q96RQ1 377 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 PTPRMP28827 1452 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 ITGALP20701 1170 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 PLD1Q13393 1074 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 CAMK2GQ13555 558 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 MARCOQ9UEW3 520 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 MDH1BQ5I0G3 518 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 TMC2Q8TDI7 906 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 DNAJB3Q8WWF6 145 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 MAN1C1Q9NR34 630 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 TLR8Q9NR97 1041 aaKnown RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 DBR1Q9UK59 544 aaKnown RBP19.66■□□□□ 0.74
SMPD3-201ENST00000219334 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
SMPD3-201ENST00000219334 PJA2O43164 708 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 PSTPIP1O43586 416 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 VPS26AO75436 327 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 NCKAP1LP55160 1127 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 KCNK10P57789 538 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 CATSPER1Q8NEC5 780 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 AKT1S1Q96B36 256 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 PNKPQ96T60 521 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 ENDOD1O94919 500 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 WEE1P30291 646 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 OVOS1Q6IE37 1185 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 PHACTR4Q8IZ21 702 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 ACSF2Q96CM8 615 aaPredicted RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 CBWD1Q9BRT8 395 aa19.65■□□□□ 0.74
SMPD3-201ENST00000219334 FRMD8P1Q9BZ68 369 aaPredicted RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 IRX2Q9BZI1 471 aaPredicted RBP19.65■□□□□ 0.74
SMPD3-201ENST00000219334 COPS7BQ9H9Q2 264 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms