RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
SIX4-201ENST00000216513 ELAC2Q9BQ52 826 aaKnown RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 CAPN10Q9HC96 672 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 VCLP18206 1134 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 POLR2EP19388 210 aaKnown RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 E2F4Q16254 413 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 UNC45BQ8IWX7 931 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 STK33Q9BYT3 514 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 MOXD2PA6NHM9 499 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 CRYBB1P53674 252 aaPredicted RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 RARS2Q5T160 578 aaKnown RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 TRMT10CQ7L0Y3 403 aaKnown RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 MROH1Q8NDA8 1641 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 MUTP22033 750 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 CDC25BP30305 580 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 OCRLQ01968 901 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 KIF19Q2TAC6 998 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 PABPC1LQ4VXU2 614 aaKnown RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 FAM124AQ86V42 546 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 WDR49Q8IV35 697 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 PPTC7Q8NI37 304 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 CHP1Q99653 195 aa14.35□□□□□ -0.11
SIX4-201ENST00000216513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
SIX4-201ENST00000216513 KPNA3O00505 521 aaPredicted RBP14.34□□□□□ -0.11
SIX4-201ENST00000216513 ACKR2O00590 384 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
SIX4-201ENST00000216513 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 VDRP11473 427 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 PDAP1Q13442 181 aaKnown RBP14.34□□□□□ -0.11
SIX4-201ENST00000216513 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 GTSE1Q9NYZ3 720 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 DCTN4Q9UJW0 460 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
SIX4-201ENST00000216513 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ZBTB39O15060 712 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 SLC9A1P19634 815 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 GGCXP38435 758 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 CASP8Q14790 479 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 TEKT4Q8WW24 435 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 SENP8Q96LD8 212 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ZNF212Q9UDV6 495 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 SMIM24O75264 130 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ARHGAP25P42331 645 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 RNPEPQ9H4A4 650 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ANP32DO95626 131 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 EPB42P16452 691 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 HDCP19113 662 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 TBX4P57082 545 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 TMPRSS15P98073 1019 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 ZBTB45Q96K62 511 aaPredicted RBP14.34□□□□□ -0.11
SIX4-201ENST00000216513 UNC93B1Q9H1C4 597 aa14.34□□□□□ -0.11
SIX4-201ENST00000216513 PMPCBO75439 489 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 CTSEP14091 401 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 WASHC5Q12768 1159 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 POM121L1PQ3SYA9 428 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 KCTD17Q8N5Z5 321 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 APBB2Q92870 758 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 TRIM66O15016 1216 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 HIC1Q14526 733 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 NIPA1Q7RTP0 329 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 TFAP2DQ7Z6R9 452 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 BLOC1S5Q8TDH9 187 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 MKL1Q969V6 931 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 RIPK3Q9Y572 518 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 FHOD1Q9Y613 1164 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.11
SIX4-201ENST00000216513 TREHO43280 583 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 GARTP22102 1010 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 RARRES1P49788 294 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 CUL1Q13616 776 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 GIT2Q14161 759 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 SLC5A5Q92911 643 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 TMA16Q96EY4 203 aaKnown RBP14.33□□□□□ -0.12
SIX4-201ENST00000216513 ZBTB18Q99592 522 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 SPATA16Q9BXB7 569 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 MYO1DO94832 1006 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 FDPSP14324 419 aaKnown RBP14.33□□□□□ -0.12
SIX4-201ENST00000216513 UBXN2BQ14CS0 331 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 DOK6Q6PKX4 331 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 DSG4Q86SJ6 1040 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 SLC39A10Q9ULF5 831 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 COBLL1Q53SF7 1204 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
SIX4-201ENST00000216513 KIF2CQ99661 725 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 EVA1BQ9NVM1 165 aa14.33□□□□□ -0.12
SIX4-201ENST00000216513 SLC9A3R1O14745 358 aaPredicted RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 GPM6BQ13491 265 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms