RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 POLIQ9UNA4 740 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 CNTNAP2Q9UHC6 1331 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 BPIFB4P59827 614 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 HIF1AQ16665 826 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 DSTYKQ6XUX3 929 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 ZNF677Q86XU0 584 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 RCOR2Q8IZ40 523 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 CEP120Q8N960 986 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 PYROXD1Q8WU10 500 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 ASCC2Q9H1I8 757 aaPredicted RBP16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 TXLNGQ9NUQ3 528 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 ALOX15BO15296 676 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 STAM2O75886 525 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 NR1H3Q13133 447 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 MMRN1Q13201 1228 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 FAXCQ5TGI0 409 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 NAIF1Q69YI7 327 aaPredicted RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 DENND1BQ6P3S1 775 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 ZC3H18Q86VM9 953 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 DNERQ8NFT8 737 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 HSPH1Q92598 858 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 CISHQ9NSE2 258 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 ARL8BQ9NVJ2 186 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 ARMCX1Q9P291 453 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 CSDE1O75534 798 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 CD19P15391 556 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 MARK3P27448 753 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 RPL22P35268 128 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 ACVR2BQ13705 512 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 TFDP3Q5H9I0 405 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 CENPUQ71F23 418 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 BBOF1Q8ND07 529 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 TTC17Q96AE7 1141 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 LRMDAQ9H2I8 198 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 SCINQ9Y6U3 715 aa16.61■□□□□ 0.25
SNAPC1-201ENST00000216294 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 LOC285556D6RIA3 1793 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 CNMDO75829 334 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 PSEN1P49768 467 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 TFAMQ00059 246 aaKnown RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 ANKRD13AQ8IZ07 590 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 MCPH1Q8NEM0 835 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 DTX3LQ8TDB6 740 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 PSMC3IPQ9P2W1 217 aaPredicted RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 ENO4A6NNW6 628 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 PRPF4O43172 522 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 ZC3H11AO75152 810 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 TPBGLP0DKB5 382 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 PSMA2P25787 234 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 CLDN10P78369 228 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 SEPT7Q16181 437 aaKnown RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 SERAC1Q96JX3 654 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 FAM111AQ96PZ2 611 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 PPP1R16BQ96T49 567 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 MECRQ9BV79 373 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 HEY2Q9UBP5 337 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 ACTL7BQ9Y614 415 aa16.6■□□□□ 0.25
SNAPC1-201ENST00000216294 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 E5RJQ4 531 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 ABHD2P08910 425 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 GNAZP19086 355 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 EPHX2P34913 555 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 PTPN20Q4JDL3 420 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 RELL1Q8IUW5 271 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 MAB21L3Q8N8X9 362 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 RNPEPL1Q9HAU8 725 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 TCRBV5S1A1TA0A578 114 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 C3orf70A6NLC5 250 aaPredicted RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 F5H423 210 aaPredicted RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 MAGEB2O15479 319 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 GRAP2O75791 330 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 PGK2P07205 417 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 BGNP21810 368 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 SERPINB3P29508 390 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 GEMIN4P57678 1058 aaKnown RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 MORF4L2Q15014 288 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms