RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ASB14A6NK59 587 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 TTC36A6NLP5 189 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 HCRTO43612 131 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 LGALS2P05162 132 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 YBX3P16989 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 GARTP22102 1010 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 TNFAIP2Q03169 654 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 C15orf59Q2T9L4 293 aaPredicted RBP13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 AGBL2Q5U5Z8 902 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 ERP27Q96DN0 273 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 BCORQ6W2J9 1755 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 TUBP50607 506 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 JAM2P57087 298 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 ACBD5Q5T8D3 534 aaPredicted RBP13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 AGAP3Q96P47 875 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 SIK2Q9H0K1 926 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 PGK1P00558 417 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 TBXAS1P24557 533 aaPredicted RBP13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 RFC1P35251 1148 aaPredicted RBP13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 ERMARDQ5T6L9 678 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 SYT15Q9BQS2 421 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
PCDHB4-201ENST00000194152 COL22A1Q8NFW1 1626 aaPredicted RBP13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 FAM187AA6NFU0 413 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 SKIP12755 728 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 ZACNQ401N2 412 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 LRRC57Q8N9N7 239 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 RILPQ96NA2 401 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 DOCK2Q92608 1830 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 ECM29Q5VYK3 1845 aa13.52□□□□□ -0.24
PCDHB4-201ENST00000194152 SLC25A27O95847 323 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 C1orf220Q5T0J3 134 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 MPZL3Q6UWV2 235 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 DRAXINQ8NBI3 349 aaPredicted RBP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 DNERQ8NFT8 737 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 RUBCNQ92622 972 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 RBM15Q96T37 977 aaKnown RBP eCLIP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 CGRRF1Q99675 332 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 PITPNM3Q9BZ71 974 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 CHMP2BQ9UQN3 213 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 GPR25O00155 361 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 KIF22Q14807 665 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 CD302Q8IX05 232 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 ABRAQ8N0Z2 381 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 CDT1Q9H211 546 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 LRRC4Q9HBW1 653 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
PCDHB4-201ENST00000194152 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 ENTPD5O75356 428 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 GSTA1P08263 222 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 NDST1P52848 882 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 IL9RQ01113 521 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 DSTYKQ6XUX3 929 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 RNF168Q8IYW5 571 aaPredicted RBP13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 ACTRT1Q8TDG2 376 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 TMC2Q8TDI7 906 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 UCMAQ8WVF2 138 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 L3MBTL3Q96JM7 780 aaPredicted RBP13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 GPR20Q99678 358 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 DNPEPQ9ULA0 475 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 ZNF711Q9Y462 761 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 A6NJR5 290 aa13.51□□□□□ -0.25
PCDHB4-201ENST00000194152 NVLO15381 856 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms