RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CENPTQ96BT3 561 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 TTC25Q96NG3 672 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 LRRC4CQ9HCJ2 640 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 NINJ2Q9NZG7 142 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 SHOC2Q9UQ13 582 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 SNX9Q9Y5X1 595 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 A6NJR5 290 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 MCF2LO15068 1137 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CST8O60676 142 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 ABHD2P08910 425 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CHN1P15882 459 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 KDELR1P24390 212 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 MIPP30301 263 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 AXLP30530 894 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 PCK1P35558 622 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CPT1AP50416 773 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 ZNF143P52747 638 aaPredicted RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 OTUD4Q01804 1114 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 PPARDQ03181 441 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 AUHQ13825 339 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 MFSD10Q14728 455 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 OASLQ15646 514 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 KYNUQ16719 465 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 KCNT1Q5JUK3 1230 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 UBAP2Q5T6F2 1119 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 BBS12Q6ZW61 710 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 PCGF5Q86SE9 256 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 RELL1Q8IUW5 271 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 RSAD2Q8WXG1 361 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 HSPH1Q92598 858 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CFAP57Q96MR6 1250 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 ZNF560Q96MR9 790 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 XPO6Q96QU8 1125 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CNPY3Q9BT09 278 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 KATNAL1Q9BW62 490 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 ADAMTS10Q9H324 1103 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 INTS9Q9NV88 658 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 PCSK1NQ9UHG2 260 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 CPA4Q9UI42 421 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 TPX2Q9ULW0 747 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 USP18Q9UMW8 372 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 UBQLN1Q9UMX0 589 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
VAMP3-201ENST00000054666 FAM169AQ9Y6X4 670 aa8.68□□□□□ -1.02
VAMP3-201ENST00000054666 E5RJQ4 531 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 ADCY6O43306 1168 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 PRPSAP2O60256 369 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 CDH16O75309 829 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 GPR32O75388 356 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 RECQL4O94761 1208 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 DARSP14868 501 aaKnown RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 IL1R2P27930 398 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 IFI35P80217 286 aaPredicted RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 STAT4Q14765 748 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 FAM183BPQ6ZVS7 135 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 RIBC1Q8N443 379 aaPredicted RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 SLC35B2Q8TB61 432 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 ACTL9Q8TC94 416 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 DYDC1Q8WWB3 177 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 TMEM121Q9BTD3 319 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 APOL6Q9BWW8 343 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 CALN1Q9BXU9 219 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 MAK16Q9BXY0 300 aaKnown RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 EIF2AQ9BY44 585 aaKnown RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 NSRP1Q9H0G5 558 aaKnown RBP8.67□□□□□ -1.02
VAMP3-201ENST00000054666 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 SAYSD1Q9NPB0 183 aa8.67□□□□□ -1.02
VAMP3-201ENST00000054666 A0A087WUV0 522 aaPredicted RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 MBLAC1A4D2B0 266 aaPredicted RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 C3orf70A6NLC5 250 aaPredicted RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 APOC4-APOC2K7ER74 178 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 TCEA3O75764 348 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CD4P01730 458 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 APOC2P02655 101 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 PDGFRAP16234 1089 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 MAGEA4P43358 317 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CORO7P57737 925 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 KRT81Q14533 505 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 GLRA4Q5JXX5 417 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 ERMARDQ5T6L9 678 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CYP4F22Q6NT55 531 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CENPUQ71F23 418 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 PRUNE1Q86TP1 453 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 SESTD1Q86VW0 696 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 UNC93AQ86WB7 457 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 OR6B3Q8NGW1 331 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 MDM1Q8TC05 714 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 ARHGEF2Q92974 986 aaKnown RBP8.66□□□□□ -1.02
VAMP3-201ENST00000054666 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 C9orf72Q96LT7 481 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 PTPN18Q99952 460 aa8.66□□□□□ -1.02
VAMP3-201ENST00000054666 NCAPGQ9BPX3 1015 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms