RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ANKRD52Q8NB46 1076 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 ATL2Q8NHH9 583 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 C1orf54Q8WWF1 131 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 CNPY3Q9BT09 278 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 SNX25Q9H3E2 840 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 CHST7Q9NS84 486 aa15.07■□□□□ 0
RTFDC1-201ENST00000023939 C2CD4BA6NLJ0 364 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 E5RJQ4 531 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 POLR3GO15318 223 aaPredicted RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 HUS1O60921 280 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 PPFIA2O75334 1257 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TJP3O95049 919 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 CTSHP09668 335 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 RPL21P46778 160 aaKnown RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 PTK6Q13882 451 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 DSC3Q14574 896 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TRIM71Q2Q1W2 868 aaKnown RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 ATP13A4Q4VNC1 1196 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 FAM102AQ5T9C2 384 aaPredicted RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 MFSD7Q6UXD7 560 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TMC3Q7Z5M5 1100 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ANKS1BQ7Z6G8 1248 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 FMO2Q99518 471 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 AGO3Q9H9G7 860 aaKnown RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 ASNSD1Q9NWL6 643 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 SNX24Q9Y343 169 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 NEU2Q9Y3R4 380 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 hCG_1818297A0A087WSY0 165 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 C3orf70A6NLC5 250 aaPredicted RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 GAS8O95995 478 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 GPD1P21695 349 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 THPOP40225 353 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 CDKN2BP42772 138 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 KCNJ1P48048 391 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 BCAT1P54687 386 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ITGA7Q13683 1181 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TFDP3Q5H9I0 405 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 PMF1Q6P1K2 205 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 OLFML1Q6UWY5 402 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 FAM183BPQ6ZVS7 135 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ARCQ7LC44 396 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ADGRF2Q8IZF7 708 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ART4Q93070 314 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 TNIP3Q96KP6 325 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 ZIM3Q96PE6 472 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 NCAPGQ9BPX3 1015 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TSEN34Q9BSV6 310 aaKnown RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 HEMGNQ9BXL5 484 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TRIM31Q9BZY9 425 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 TSPYL2Q9H2G4 693 aaPredicted RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 GOLGA2P5Q9HBQ8 144 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 RNF19AQ9NV58 838 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 WHRNQ9P202 907 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 R3HDM2Q9Y2K5 976 aaKnown RBP15.06■□□□□ 0
RTFDC1-201ENST00000023939 FAN1Q9Y2M0 1017 aa15.06■□□□□ 0
RTFDC1-201ENST00000023939 MOXD2PA6NHM9 499 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 GOLGA8KD6RF30 607 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 GABRDO14764 452 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 RNF40O75150 1001 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 RNF8O76064 485 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 KCNA4P22459 653 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 RPL9P32969 192 aaKnown RBP15.05■□□□□ -0
RTFDC1-201ENST00000023939 HSD17B3P37058 310 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 ACLYP53396 1101 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 C1QTNF8P60827 252 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 LMNB2Q03252 620 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 PDE4CQ08493 712 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 BST2Q10589 180 aaKnown RBP15.05■□□□□ -0
RTFDC1-201ENST00000023939 TXNRD3NBQ6F5E7 133 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 OR6B2Q6IFH4 312 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 EMC1Q8N766 993 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 CMASQ8NFW8 434 aaPredicted RBP15.05■□□□□ -0
RTFDC1-201ENST00000023939 RAPGEF5Q92565 580 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 ZFP42Q96MM3 310 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 RUFY1Q96T51 708 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 FRMD8P1Q9BZ68 369 aaPredicted RBP15.05■□□□□ -0
RTFDC1-201ENST00000023939 DPEP3Q9H4B8 488 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 FAM49BQ9NUQ9 324 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 PADI3Q9ULW8 664 aa15.05■□□□□ -0
RTFDC1-201ENST00000023939 THP07101 528 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 PAX3P23760 479 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 LMO2P25791 158 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 IL1R2P27930 398 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 GJC1P36383 396 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 MAP2K2P36507 400 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 FLT3P36888 993 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 MLH1P40692 756 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 ACADSBP45954 432 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 SLC6A3Q01959 620 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 KRT17Q04695 432 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 LPIN1Q14693 890 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 PPP1R7Q15435 360 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
RTFDC1-201ENST00000023939 AGMOQ6ZNB7 445 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 ATG4AQ8WYN0 398 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 KHSRPQ92945 711 aaKnown RBP eCLIP15.04■□□□□ -0
RTFDC1-201ENST00000023939 EXOC4Q96A65 974 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms