RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Vmn2r77L7N2B7 854 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Scrg1O88745 98 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Itgb1P09055 798 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trim21Q62191 470 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Crb2Q80YA8 1282 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Aste1Q8BIR2 672 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tada3Q8R0L9 432 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rbm12Q8R4X3 992 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pcdhb19Q91Y01 801 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ttc33Q9D6K7 262 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rad9aQ9Z0F6 389 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cyp2t4E9PWV0 503 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm11239E9Q5Z9 360 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm11237F2Z3W5 360 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm11238F2Z478 360 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Enc1O35709 589 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Adam15O88839 864 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mxi1P50540 228 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tcp11Q01755 566 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm428Q3UTE2 360 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tfap2bQ61313 459 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 PtprjQ64455 1238 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fbxw21Q8BI38 468 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Smarcal1Q8BJL0 910 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Wdr35Q8BND3 1181 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmem132cQ8CEF9 1099 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 IntS13Q8QZV7 732 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Taf12Q8VE65 161 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr345Q8VGK4 311 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Spg21Q9CQC8 308 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Piwil1Q9JMB7 862 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Scn5aQ9JJV9 2019 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm10717D3Z1I8 228 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 BC049352E9Q2Z6 85 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cacna2d1O08532 1103 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fam193bQ3U2K0 892 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Upf3aQ3ULJ3 422 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 B020004J07RikQ3UTC0 476 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ttc9Q3V038 219 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Atp11bQ6DFW5 1175 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Jade3Q6IE82 823 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gpatch2lQ6PE65 482 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 HpseQ6YGZ1 535 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gpr142Q7TQN9 365 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 R3hdm2Q80TM6 1044 aaKnown RBP10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slc9a4Q8BUE1 797 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gpc5Q8CAL5 572 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Btbd6Q8K2J9 488 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mcoln2Q8K595 566 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Uroc1Q8VC12 676 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rnf138rt1Q9D9M9 248 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Abcg8Q9DBM0 673 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Calhm3J3QMI4 347 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 DffaO54786 331 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cldn5O54942 218 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 DsppP97399 934 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Adamts1P97857 968 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Krt80Q0VBK2 452 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dzip1lQ499E4 774 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Grm6Q5NCH9 871 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Enpp3Q6DYE8 874 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Prrt3Q6PE13 971 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Sytl5Q80T23 753 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fnbp1Q80TY0 616 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Prrg2Q8R182 198 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 CmasQ99KK2 432 aaKnown RBP10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rilpl2Q99LE1 197 aa10.46□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Obsl1D3YYU8 1804 aaKnown RBP10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Zfp472B0V2W5 534 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 DgkiD3YWQ0 1071 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 P01650 108 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 P01653 108 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Resp18P47939 175 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 IhhP97812 411 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Znf367Q0VDT2 340 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Klra5Q60652 266 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 WtipQ7TQJ8 398 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Pcsk9Q80W65 694 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Ttc7aQ8BGB2 858 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 FsbpQ8BKE5 299 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam193aQ8CGI1 1231 aaKnown RBP10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 CenpkQ9ESN5 271 aa10.46□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Znf804aA2AKY4 1200 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Myo1eE9Q634 1107 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gm7694J3QNH8 270 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Axin1O35625 863 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Adam19O35674 920 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Odc1P00860 461 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Rps6ka1P18653 724 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 CkbQ04447 381 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Dab2ipQ3UHC7 1189 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Cep112Q5PR68 954 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 OgdhQ60597 1023 aaKnown RBP10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Nrg1Q6DR99 700 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Lsm8Q6ZWM4 96 aaKnown RBP10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Slc20a2Q80UP8 656 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Kat14Q8CID0 779 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Akr1c14Q91WT7 323 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 NamptQ99KQ4 491 aa10.45□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Pramel1Q99MW3 458 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms