RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gprin1Q3UNH4 932 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sult1d1Q3UZZ6 295 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Adamts18Q4VC17 1219 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Luc7l3Q5SUF2 432 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Q6GQV0 436 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 LdhdQ7TNG8 484 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Olfr670Q7TRP3 312 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Wdr27Q8C5V5 780 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Prpf31Q8CCF0 499 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Fam151aQ8QZW3 608 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ppp1r16bQ8VHQ3 568 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kdelr1Q99JH8 212 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Smyd3Q9CWR2 428 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nt5c3aQ9D020 331 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Dkc1Q9ESX5 509 aaKnown RBP10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Arhgef10Q8C033 1345 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Vmn2r104E9Q2J5 860 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Oog1E9Q5G7 496 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm3415J3QMS8 315 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Klrk1O54709 232 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 ZfxP17012 799 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stx2Q00262 289 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm8773Q3UQ24 132 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Hmgb4Q6P8W9 181 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf365Q8BG89 408 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tubgcp5Q8BKN5 1024 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Phka2Q8BWJ3 1235 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ttc39bQ8BYY4 617 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trappc12Q8K2L8 797 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nrbp2Q91V36 499 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Pcdha9Q91Y11 979 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm3404Q9D506 307 aa10.24□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm27029A2A4P4 543 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tatdn2B7ZNL9 783 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Raph1F2Z3U3 1266 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Galnt4O08832 578 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rtn2O70622 471 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cetn1P41209 172 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Scarf2P59222 833 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Taf1bP97358 586 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tars2Q3UQ84 723 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Samhd1Q60710 627 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nudt16Q6P3D0 195 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 GnasQ6R0H7 1133 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mcph1Q7TT79 822 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 March4Q80TE3 409 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 CyldQ80TQ2 952 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Btbd10Q80X66 475 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmem132cQ8CEF9 1099 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 DolkQ8R2Y3 534 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Atad3Q925I1 591 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rnf112Q96DY5 654 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ier5lQ99J55 406 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 MceeQ9D1I5 178 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Map3k20Q9ESL4 802 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kat2aQ9JHD2 830 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Hes6Q9JHE6 224 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ccdc22Q9JIG7 627 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rfx5Q9JL61 658 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sh2d3cQ9QZS8 854 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trpc2Q9R244 1172 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ly6iQ9WU67 134 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gbp2Q9Z0E6 589 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf536Q8K083 1302 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 UtrnE9Q6R7 3430 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Olfr456B2RT27 312 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Apold1E9Q0X2 246 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 GclmO09172 274 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Magea1O89006 320 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Magea5O89009 320 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Magea8O89012 320 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ndufs6P52503 116 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Crnkl1P63154 690 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Glt6d1Q2NKH9 311 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Itga1Q3V3R4 1179 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 B3gnt3Q5JCS9 372 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm11437Q5QR91 290 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mks1Q5SW45 561 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 RimklbQ80WS1 387 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rps6kc1Q8BLK9 1056 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rfx6Q8C7R7 927 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Snx30Q8CE50 437 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Olfr458Q8VF80 313 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Olfr457Q8VGP5 313 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tssk3Q9D2E1 268 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sun1Q9D666 913 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Magea2Q9R2A2 320 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nupr1Q9WTK0 80 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Robo3Q9Z2I4 1366 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm3371F7CQW8 167 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Per2O54943 1257 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Adamts10P58459 1104 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rab6bP61294 208 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Arhgap45Q3TBD2 1116 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Eif2dQ61211 570 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rab34Q64008 259 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kcnk18Q6VV64 394 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rhpn2Q8BWR8 686 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Dhx32Q8BZS9 744 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kbtbd13Q8C828 458 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms