RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Foxn2E9Q7L6 429 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rgs22G3UYX5 1258 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Vmn2r19G5E8G4 854 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm3383J3QQ59 259 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mdh1P14152 334 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rasgrf1P27671 1262 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Aarsd1Q3THG9 412 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mxd4Q60948 209 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 E2f5Q61502 335 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tmem202Q80W35 275 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rnaseh2bQ80ZV0 308 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q8C5S3 137 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 C130026I21RikQ8C898 291 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rsad2Q8CBB9 362 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cypt1Q8CH20 168 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tada2aQ8CHV6 443 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pak2Q8CIN4 524 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fbxo33Q8VE08 562 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Akr1c14Q91WT7 323 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Sdcbp2Q99JZ0 292 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 DpysQ9EQF5 519 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dnajb2Q9QYI5 324 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Myh10Q61879 1976 aaKnown RBP9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm3409A0A0G2JE67 319 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr1023A2ASU6 311 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Birc5O70201 140 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Slc10a3P21129 473 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ptk2P34152 1090 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Slc1a2P43006 572 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Hspa8P63017 646 aaKnown RBP9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tspyl5Q69ZB3 406 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Spag7Q7TNE3 227 aaKnown RBP9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr1415Q7TQS4 311 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fbxw21Q8BI38 468 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Sh3rf3Q8C120 878 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Kdm1bQ8CIG3 826 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tbc1d19Q8VDV7 526 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr1416Q8VGU4 312 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 MrgpreQ91ZB7 310 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Spred2Q924S7 410 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Eps8l2Q99K30 729 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mta2Q9R190 668 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 AlpiF8VPQ6 554 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rgs2O08849 211 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01650 108 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01653 108 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ctnna1P26231 906 aaKnown RBP9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Epha3P29319 983 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 SqleP52019 572 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gdpd4Q3TT99 632 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ccdc157Q5SPX1 718 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Trim37Q6PCX9 961 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lrfn2Q80TG9 788 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Znf598Q80YR4 908 aaKnown RBP9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Znf473Q8BI67 892 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ccdc87Q8CDL9 855 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fam13bQ8K2H3 851 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Snx9Q91VH2 595 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pomgnt1Q91X88 660 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 TfgQ9Z1A1 397 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Krt16Q9Z2K1 469 aa9.16□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dnah12Q3V0Q1 3086 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Prdm15E9Q8T2 1174 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Samd15F6XZJ7 620 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm7694J3QNH8 270 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pex5O09012 639 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 TyrobpO54885 114 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Inpp5jP59644 1003 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Bpifa6Q0VGU8 367 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr8Q60892 310 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cntn2Q61330 1040 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rhot1Q8BG51 631 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Taf5Q8C092 801 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Apol7cQ8C6E1 369 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 UvragQ8K245 698 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Sgpl1Q8R0X7 568 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Twf1Q91YR1 350 aaKnown RBP9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dhx58Q99J87 678 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rabl3Q9D4V7 236 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rexo2Q9D8S4 237 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q9D9D9 101 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Vmn1r65Q9EPS7 332 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Timp4Q9JHB3 224 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Nme7Q9QXL8 395 aa9.15□□□□□ -0.94
Trim39-201ENSMUST00000042717 Olfr1305A2AVW3 312 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sec24cG3X972 1096 aaKnown RBP9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cacna2d1O08532 1103 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dync1i1O88485 628 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Btbd1P58544 488 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Adamts1P97857 968 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tekt4Q149S1 447 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Skap2Q3UND0 358 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Esyt3Q5DTI8 891 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cfap97Q6ZPR1 541 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Q8BGD0 127 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rhpn2Q8BWR8 686 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ugt3a2Q8JZZ0 523 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ttc9bQ9D6E4 239 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccdc91Q9D8L5 442 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 MajinQ9D992 256 aa9.15□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms