RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Serpinb3aG3X9V8 387 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pik3r2O08908 722 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Serpinh1P19324 417 aaKnown RBP13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Hoxa11P31311 313 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Foxp2P58463 714 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 VcpQ01853 806 aaKnown RBP13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Psg29Q3URN6 468 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zfp956Q3UZY6 572 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Arhgap10Q6Y5D8 786 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Trpm4Q7TN37 1213 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Orai2Q8BH10 250 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mical2Q8BML1 960 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Unc45bQ8CGY6 931 aaKnown RBP13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PpatQ8CIH9 517 aa13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PnkpQ9JLV6 522 aaKnown RBP13.27□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Mageb2A2AHM0 380 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Vmn2r104E9Q2J5 860 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Spata31d1dE9Q5W2 1247 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Glud1P26443 558 aaKnown RBP13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Actr2P61161 394 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ankrd34bQ3UUF8 508 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dennd2cQ6P9P8 914 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Def8Q99J78 448 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fam162aQ9D6U8 155 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Scgb2b21A0A087WQA9 112 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ms4a14A0A087WSD2 1232 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm3402K7N5P2 326 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Sptlc1O35704 473 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Adcy1O88444 1118 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ccnd1P25322 295 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PdgfraP26618 1089 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Stmn1P54227 149 aaKnown RBP13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cdh8P97291 799 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Smyd1P97443 490 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ppm1jQ149T7 507 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Wbp4Q61048 376 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fam107aQ78TU8 144 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Btnl9Q8BJE2 536 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Clic5Q8BXK9 251 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Svs3bQ8BZH8 265 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 FdpsQ920E5 353 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Stk33Q924X7 491 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PawrQ925B0 333 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ubxn2aQ99KJ0 258 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Emc2Q9CRD2 297 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Kat2aQ9JHD2 830 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tcirg1Q9JHF5 834 aa13.27□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CnpP16330 420 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Klhdc9Q3USL1 350 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Arhgap26Q6ZQ82 814 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Usp6nlQ80XC3 819 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pum3Q8BKS9 647 aaKnown RBP13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Trim7Q923T7 510 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Sppl3Q9CUS9 384 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Oma1Q9D8H7 521 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Clec4aQ9QZ15 238 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 CblP22682 913 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Faf1P54731 649 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ttc39dQ0VF76 604 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pdp2Q504M2 532 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Xlr3aQ60595 226 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Nsun6Q7TS68 476 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Znf579Q80VM4 562 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 ChfrQ810L3 664 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Nr3c2Q8VII8 978 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ttc30a1Q99J38 664 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Anxa9Q9JHQ0 345 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Chek2Q9Z265 546 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Lilra5D3Z7A9 295 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Usp17ldG5E8G2 545 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Usp17lcG5E8I7 545 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GfapP03995 430 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Flt3Q00342 1000 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Znf112Q0VAW7 879 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pbxip1Q3TVI8 727 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 D630036H23RikQ3UQD6 204 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Fra10ac1Q8BP78 315 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 SncaipQ99ME3 962 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ndufaf1Q9CWX2 328 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 AenQ9CZI9 336 aaKnown RBP13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ror1Q9Z139 937 aa13.26□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Dhx35A2ACQ1 703 aaKnown RBP13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Atf6F6VAN0 656 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GclmO09172 274 aaKnown RBP13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Stx1bP61264 288 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Slc24a2Q14BI1 711 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ino80bQ99PT3 375 aaKnown RBP13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ergic2Q9CR89 377 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rex1bdQ9CYZ6 169 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gtf2h1Q9DBA9 547 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Itgb1bp2Q9R000 350 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ifi202Q9R002 445 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Mettl1Q9Z120 268 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Gm4985A2ALC6 410 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Irf8P23611 424 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tfap2bQ61313 459 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ptger2Q62053 362 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Map2k2Q63932 401 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Lrrc8eQ66JT1 795 aa13.25□□□□□ -0.29
Clcn3-201ENSMUST00000004430 E2f7Q6S7F2 904 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms