RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W GIS2P53849 153 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
BUD8YLR353W API2Q04413 109 aa3.54□□□□□ -1.84
BUD8YLR353W CSM4Q08955 156 aa3.54□□□□□ -1.84
BUD8YLR353W RPS22AP0C0W1 130 aaKnown RBP3.54□□□□□ -1.84
BUD8YLR353W MRPL44P19956 98 aa3.54□□□□□ -1.84
BUD8YLR353W SCM4P32564 187 aa3.54□□□□□ -1.84
BUD8YLR353W CPR5P35176 225 aa3.54□□□□□ -1.84
BUD8YLR353W MIC12P38341 106 aa3.54□□□□□ -1.84
BUD8YLR353W YHR138CP38841 114 aaPredicted RBP3.54□□□□□ -1.84
BUD8YLR353W NSA2P40078 261 aaKnown RBP3.54□□□□□ -1.84
BUD8YLR353W PRE5P40302 234 aaKnown RBP3.54□□□□□ -1.84
BUD8YLR353W YGR269WP40326 108 aa3.54□□□□□ -1.84
BUD8YLR353W YPL067CQ02754 198 aa3.54□□□□□ -1.84
BUD8YLR353W YOR192C-CQ3E736 78 aa3.54□□□□□ -1.84
BUD8YLR353W FCY2P17064 533 aa3.53□□□□□ -1.84
BUD8YLR353W YKL075CP36083 450 aa3.53□□□□□ -1.84
BUD8YLR353W DAD3P69850 94 aa3.53□□□□□ -1.84
BUD8YLR353W RCE1Q03530 315 aa3.53□□□□□ -1.84
BUD8YLR353W SCW10Q04951 389 aa3.53□□□□□ -1.84
BUD8YLR353W YOL118CQ08259 102 aa3.53□□□□□ -1.84
BUD8YLR353W RRS1Q08746 203 aaKnown RBP3.53□□□□□ -1.84
BUD8YLR353W YPS3Q12303 508 aa3.53□□□□□ -1.84
BUD8YLR353W BOL1Q3E793 110 aa3.53□□□□□ -1.84
BUD8YLR353W Q0144Q9ZZW2 109 aa3.53□□□□□ -1.84
BUD8YLR353W FMP49A0A023PZB3 126 aa3.52□□□□□ -1.85
BUD8YLR353W RPS25BP0C0T4 108 aaKnown RBP3.52□□□□□ -1.85
BUD8YLR353W URA5P13298 226 aaKnown RBP3.52□□□□□ -1.85
BUD8YLR353W SMP1P38128 452 aa3.52□□□□□ -1.85
BUD8YLR353W GPI2P46961 280 aa3.52□□□□□ -1.85
BUD8YLR353W HSK3P69852 69 aa3.52□□□□□ -1.85
BUD8YLR353W SEN15Q04675 128 aa3.52□□□□□ -1.85
BUD8YLR353W FRQ1Q06389 190 aa3.52□□□□□ -1.85
BUD8YLR353W YKL183C-AQ3E765 70 aa3.52□□□□□ -1.85
BUD8YLR353W RPS25AQ3E792 108 aaPredicted RBP3.52□□□□□ -1.85
BUD8YLR353W YNR034W-AQ3E841 98 aa3.52□□□□□ -1.85
BUD8YLR353W HTB1P02293 131 aaKnown RBP3.51□□□□□ -1.85
BUD8YLR353W HTB2P02294 131 aa3.51□□□□□ -1.85
BUD8YLR353W FUN14P18411 198 aa3.51□□□□□ -1.85
BUD8YLR353W YMR31P19955 123 aa3.51□□□□□ -1.85
BUD8YLR353W ROX3P25046 220 aa3.51□□□□□ -1.85
BUD8YLR353W YER084WP40057 128 aa3.51□□□□□ -1.85
BUD8YLR353W YNL194CP40169 301 aa3.51□□□□□ -1.85
BUD8YLR353W CYB5P40312 120 aa3.51□□□□□ -1.85
BUD8YLR353W ARP3P47117 449 aaKnown RBP3.51□□□□□ -1.85
BUD8YLR353W FIT3Q08907 204 aa3.51□□□□□ -1.85
BUD8YLR353W MRPL11P36521 249 aaPredicted RBP3.51□□□□□ -1.85
BUD8YLR353W ECM14P38836 430 aa3.51□□□□□ -1.85
BUD8YLR353W XPT1P47165 209 aa3.51□□□□□ -1.85
BUD8YLR353W OST3P48439 350 aa3.51□□□□□ -1.85
BUD8YLR353W RAF1Q06891 181 aa3.51□□□□□ -1.85
BUD8YLR353W FYV7Q12247 151 aa3.51□□□□□ -1.85
BUD8YLR353W YGL258W-AQ3E740 77 aa3.51□□□□□ -1.85
BUD8YLR353W YIL134C-AQ45U18 67 aa3.51□□□□□ -1.85
BUD8YLR353W YBR121C-AP0C5L4 52 aa3.5□□□□□ -1.85
BUD8YLR353W SRP14P38985 146 aa3.5□□□□□ -1.85
BUD8YLR353W YMR007WQ03675 126 aa3.5□□□□□ -1.85
BUD8YLR353W LPP1Q04396 274 aa3.5□□□□□ -1.85
BUD8YLR353W LOA1Q06508 300 aa3.5□□□□□ -1.85
BUD8YLR353W YGL010WP25338 174 aa3.49□□□□□ -1.85
BUD8YLR353W SPS18P32572 300 aa3.49□□□□□ -1.85
BUD8YLR353W DER1P38307 211 aa3.49□□□□□ -1.85
BUD8YLR353W RPB11P38902 120 aa3.49□□□□□ -1.85
BUD8YLR353W RRT13P40042 185 aa3.49□□□□□ -1.85
BUD8YLR353W SIP18P50263 79 aa3.49□□□□□ -1.85
BUD8YLR353W MIC27P50945 234 aa3.49□□□□□ -1.85
BUD8YLR353W HAL1Q01766 294 aa3.49□□□□□ -1.85
BUD8YLR353W NAT3Q06504 195 aa3.49□□□□□ -1.85
BUD8YLR353W MCH1Q07376 486 aa3.49□□□□□ -1.85
BUD8YLR353W POC4Q12245 148 aaPredicted RBP3.49□□□□□ -1.85
BUD8YLR353W SMT3Q12306 101 aaKnown RBP3.49□□□□□ -1.85
BUD8YLR353W RPL9AP05738 191 aaKnown RBP3.49□□□□□ -1.85
BUD8YLR353W RNA15P25299 296 aaPredicted RBP3.49□□□□□ -1.85
BUD8YLR353W TCA17P32613 152 aa3.49□□□□□ -1.85
BUD8YLR353W YJR015WP47090 510 aa3.49□□□□□ -1.85
BUD8YLR353W YMR244WQ04018 355 aa3.49□□□□□ -1.85
BUD8YLR353W SHH3Q04487 196 aa3.49□□□□□ -1.85
BUD8YLR353W YOR105WQ08504 108 aa3.49□□□□□ -1.85
BUD8YLR353W YDL085C-AQ3E7B7 68 aaKnown RBP3.49□□□□□ -1.85
BUD8YLR353W YOL085CQ99345 113 aa3.49□□□□□ -1.85
BUD8YLR353W POR1P04840 283 aaKnown RBP3.48□□□□□ -1.85
BUD8YLR353W ATP5P09457 212 aa3.48□□□□□ -1.85
BUD8YLR353W TOM40P23644 387 aaKnown RBP3.48□□□□□ -1.85
BUD8YLR353W SUA7P29055 345 aaPredicted RBP3.48□□□□□ -1.85
BUD8YLR353W SRP21P32342 167 aa3.48□□□□□ -1.85
BUD8YLR353W FPR2P32472 135 aa3.48□□□□□ -1.85
BUD8YLR353W GON7P46984 123 aa3.48□□□□□ -1.85
BUD8YLR353W RFM1Q12192 310 aa3.48□□□□□ -1.85
BUD8YLR353W YAL067W-AQ8TGK6 75 aa3.48□□□□□ -1.85
BUD8YLR353W QRI5P32344 111 aa3.47□□□□□ -1.85
BUD8YLR353W RPL9BP51401 191 aaKnown RBP3.47□□□□□ -1.85
BUD8YLR353W SBH2P52871 88 aa3.47□□□□□ -1.85
BUD8YLR353W DYN2Q02647 92 aa3.47□□□□□ -1.85
BUD8YLR353W DFM1Q12743 341 aaKnown RBP3.47□□□□□ -1.85
BUD8YLR353W HMRA1P0CY11 126 aa3.47□□□□□ -1.85
BUD8YLR353W CUE1P38428 203 aa3.47□□□□□ -1.85
BUD8YLR353W YAR068WP39564 161 aa3.47□□□□□ -1.85
BUD8YLR353W DSK2P48510 373 aa3.47□□□□□ -1.85
BUD8YLR353W YGR018CP53211 109 aa3.47□□□□□ -1.85
BUD8YLR353W SAE3P89114 91 aa3.47□□□□□ -1.85
BUD8YLR353W RPS22BQ3E7Y3 130 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms