RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR029W	YJR029W	MRPL27	P36526	146 aa	Predicted RBP	0.84	□□□□□ -2.28
YJR029W	YJR029W	RRT13	P40042	185 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	KNH1	P50112	268 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	EST3	Q03096	181 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	YLR179C	Q06252	201 aa	Known RBP	0.84	□□□□□ -2.28
YJR029W	YJR029W	BNR1	P40450	1375 aa		0.84	□□□□□ -2.28
YJR029W	YJR029W	MRPL33	P20084	86 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YCR099C	P25657	155 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	URA10	P30402	227 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	HSP150	P32478	413 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	PPQ1	P32945	549 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	PAM17	P36147	197 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	RSM10	Q03201	203 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	SHH3	Q04487	196 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	TVP18	Q04767	167 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	PML1	Q07930	204 aa	Predicted RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	YCL012C	Q8J0M4	134 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YRF1-2	P40105	1681 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	TIM9	O74700	87 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	RFA3	P26755	122 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	SSS1	P35179	80 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YNL194C	P40169	301 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	BRP1	P53194	125 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	CDD1	Q06549	142 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	GAT3	Q07928	141 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	CMC4	Q3E7A9	73 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YFR032C-B	Q8TGU2	87 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	INO80	P53115	1489 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	RPS13	P05756	151 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	RPA12	P32529	125 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	YKL070W	P36087	169 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YHL005C	P38752	130 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	HTD2	P38790	280 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	COX14	P39103	70 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	RPL10	P41805	221 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	VEL1	P53058	206 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	COA4	Q05809	96 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YLR296W	Q05898	108 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YRA1	Q12159	226 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	PAR32	Q12515	295 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	YOL164W-A	Q3E7A5	60 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	SIN3	P22579	1536 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YLR157W-E	P0CF00	54 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	CPR1	P14832	162 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	ROX3	P25046	220 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	MRP17	P28778	131 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	QRI5	P32344	111 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	TOM6	P33448	61 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YBL029W	P38201	376 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YEL073C	P39974	107 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	SOK2	P53438	785 aa	Predicted RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	YNL184C	P53876	108 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YMR090W	Q04304	227 aa	Known RBP	0.83	□□□□□ -2.28
YJR029W	YJR029W	EMI1	Q04406	187 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	YPR013C	Q12145	317 aa		0.83	□□□□□ -2.28
YJR029W	YJR029W	FMP49	A0A023PZB3	126 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	TFS1	P14306	219 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	TRX1	P22217	103 aa	Known RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	YNL198C	P40166	100 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	AIM20	P40451	204 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YNL320W	P42840	284 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	PTR3	P43606	678 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YNR064C	P53750	290 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	LGE1	Q02796	332 aa	Known RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	YHP1	Q04116	353 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	NAG1	Q8TGN9	163 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YCR006C	P25350	157 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	MRPL6	P32904	214 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	MRPL28	P36527	147 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	ICS3	P47034	131 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	TAD2	P47058	250 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	GAS3	Q03655	524 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YBR201C-A	Q2V2Q3	67 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YHR213W-B	Q8TGK1	99 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	PRP8	P33334	2413 aa	Known RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	PAU19	P0CE85	124 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	PAU16	P35994	123 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	UBS1	P38290	277 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	RPB11	P38902	120 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	FIS1	P40515	155 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	PAU15	P40585	124 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	FIT1	Q04433	528 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YHC1	Q05900	231 aa	Known RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	PAU17	Q12370	124 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	YER078W-A	Q3E7A2	54 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	MHP1	P43638	1398 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	PAU3	P25610	124 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	TAH1	P25638	111 aa	Predicted RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
YJR029W	YJR029W	MRPL51	Q06090	140 aa	Predicted RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	IGO2	Q9P305	131 aa		0.82	□□□□□ -2.28
YJR029W	YJR029W	TOR2	P32600	2474 aa	Known RBP	0.82	□□□□□ -2.28
YJR029W	YJR029W	YFR009W-A	P0C5M9	85 aa		0.81	□□□□□ -2.28
YJR029W	YJR029W	YER039C-A	P0CD97	72 aa		0.81	□□□□□ -2.28
YJR029W	YJR029W	YKR032W	P36127	104 aa		0.81	□□□□□ -2.28
YJR029W	YJR029W	IES5	P40060	125 aa		0.81	□□□□□ -2.28
YJR029W	YJR029W	YFL015C	P43578	164 aa		0.81	□□□□□ -2.28
YJR029W	YJR029W	YJL027C	P47063	138 aa	Predicted RBP	0.81	□□□□□ -2.28
YJR029W	YJR029W	YJR085C	P47131	105 aa	Known RBP	0.81	□□□□□ -2.28
YJR029W	YJR029W	YGR050C	P53231	118 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms