RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W MRS4P23500 304 aa1.5□□□□□ -2.17
SEC4YFL005W YCR101CP25607 182 aa1.5□□□□□ -2.17
SEC4YFL005W CDC39P25655 2108 aaKnown RBP1.5□□□□□ -2.17
SEC4YFL005W YKR070WP36151 352 aaKnown RBP1.5□□□□□ -2.17
SEC4YFL005W YEL067CP39978 195 aa1.5□□□□□ -2.17
SEC4YFL005W YGR269WP40326 108 aa1.5□□□□□ -2.17
SEC4YFL005W YGL230CP53074 147 aa1.5□□□□□ -2.17
SEC4YFL005W YGR164WP53291 111 aa1.5□□□□□ -2.17
SEC4YFL005W YDL157CQ12082 118 aa1.5□□□□□ -2.17
SEC4YFL005W YMR030W-AQ3E760 96 aa1.5□□□□□ -2.17
SEC4YFL005W YCR099CP25657 155 aa1.49□□□□□ -2.17
SEC4YFL005W YBR090CP38253 122 aa1.49□□□□□ -2.17
SEC4YFL005W GAT4P40569 121 aa1.49□□□□□ -2.17
SEC4YFL005W NMA1Q06178 401 aaKnown RBP1.49□□□□□ -2.17
SEC4YFL005W YOR097CQ12274 175 aaPredicted RBP1.49□□□□□ -2.17
SEC4YFL005W HAP2P06774 265 aa1.48□□□□□ -2.17
SEC4YFL005W RPS25BP0C0T4 108 aaKnown RBP1.48□□□□□ -2.17
SEC4YFL005W YER039C-AP0CD97 72 aa1.48□□□□□ -2.17
SEC4YFL005W INO4P13902 151 aa1.48□□□□□ -2.17
SEC4YFL005W YCL042WP25572 119 aa1.48□□□□□ -2.17
SEC4YFL005W YCR050CP25630 102 aa1.48□□□□□ -2.17
SEC4YFL005W LHP1P33399 275 aaKnown RBP1.48□□□□□ -2.17
SEC4YFL005W CCS1P40202 249 aaKnown RBP1.48□□□□□ -2.17
SEC4YFL005W GNA1P43577 159 aaPredicted RBP1.48□□□□□ -2.17
SEC4YFL005W IRC19Q07843 230 aa1.48□□□□□ -2.17
SEC4YFL005W RPS25AQ3E792 108 aaPredicted RBP1.48□□□□□ -2.17
SEC4YFL005W COA3Q3E7B2 85 aa1.48□□□□□ -2.17
SEC4YFL005W BNI1P41832 1953 aa1.48□□□□□ -2.17
SEC4YFL005W YHR212W-AP0CX91 67 aa1.47□□□□□ -2.17
SEC4YFL005W ECM31P38122 312 aa1.47□□□□□ -2.17
SEC4YFL005W SWC7Q06707 132 aa1.47□□□□□ -2.17
SEC4YFL005W YLR042CQ07990 161 aa1.47□□□□□ -2.17
SEC4YFL005W NAT5Q08689 176 aa1.47□□□□□ -2.17
SEC4YFL005W YCL001W-BQ96VH2 84 aa1.47□□□□□ -2.17
SEC4YFL005W YRF1-3P0CX14 1859 aa1.46□□□□□ -2.18
SEC4YFL005W YRF1-7P0CX15 1859 aa1.46□□□□□ -2.18
SEC4YFL005W YRF1-6P53819 1859 aa1.46□□□□□ -2.18
SEC4YFL005W GEA2P39993 1459 aaKnown RBP1.46□□□□□ -2.18
SEC4YFL005W COX5BP00425 151 aa1.46□□□□□ -2.18
SEC4YFL005W ADK1P07170 222 aaKnown RBP1.46□□□□□ -2.18
SEC4YFL005W PAM16P42949 149 aa1.46□□□□□ -2.18
SEC4YFL005W GPI19Q04082 140 aa1.46□□□□□ -2.18
SEC4YFL005W ELP6Q04868 273 aa1.46□□□□□ -2.18
SEC4YFL005W SOM1Q05676 74 aa1.46□□□□□ -2.18
SEC4YFL005W YOR385WQ08909 290 aa1.46□□□□□ -2.18
SEC4YFL005W TAR1Q8TGM6 124 aa1.46□□□□□ -2.18
SEC4YFL005W BUD4P47136 1447 aa1.46□□□□□ -2.18
SEC4YFL005W UBC5P15732 148 aa1.45□□□□□ -2.18
SEC4YFL005W MRPL11P36521 249 aaPredicted RBP1.45□□□□□ -2.18
SEC4YFL005W MRPL15P36523 253 aa1.45□□□□□ -2.18
SEC4YFL005W QCR10P37299 77 aa1.45□□□□□ -2.18
SEC4YFL005W YBR242WP38331 238 aa1.45□□□□□ -2.18
SEC4YFL005W HSP10P38910 106 aa1.45□□□□□ -2.18
SEC4YFL005W YAL064WP39711 94 aa1.45□□□□□ -2.18
SEC4YFL005W YEA6P39953 335 aa1.45□□□□□ -2.18
SEC4YFL005W ERV14P53173 138 aa1.45□□□□□ -2.18
SEC4YFL005W YPR153WQ06537 140 aa1.45□□□□□ -2.18
SEC4YFL005W GTT2Q12390 233 aa1.45□□□□□ -2.18
SEC4YFL005W OCA6Q12454 224 aa1.45□□□□□ -2.18
SEC4YFL005W GEA1P47102 1408 aaPredicted RBP1.45□□□□□ -2.18
SEC4YFL005W KRE5P22023 1365 aa1.45□□□□□ -2.18
SEC4YFL005W CAT8P39113 1433 aa1.44□□□□□ -2.18
SEC4YFL005W PAU21P0CE86 164 aa1.44□□□□□ -2.18
SEC4YFL005W PAU22P0CE87 164 aa1.44□□□□□ -2.18
SEC4YFL005W HAP3P13434 144 aa1.44□□□□□ -2.18
SEC4YFL005W SEC59P20048 519 aa1.44□□□□□ -2.18
SEC4YFL005W PRE1P22141 198 aaKnown RBP1.44□□□□□ -2.18
SEC4YFL005W TRS20P38334 175 aa1.44□□□□□ -2.18
SEC4YFL005W YMR007WQ03675 126 aa1.44□□□□□ -2.18
SEC4YFL005W YMR090WQ04304 227 aaKnown RBP1.44□□□□□ -2.18
SEC4YFL005W YDL241WQ07738 123 aa1.44□□□□□ -2.18
SEC4YFL005W MYO1P08964 1928 aa1.44□□□□□ -2.18
SEC4YFL005W SSN2P38931 1420 aa1.43□□□□□ -2.18
SEC4YFL005W FYV5P25585 152 aa1.43□□□□□ -2.18
SEC4YFL005W YKL044WP36092 106 aa1.43□□□□□ -2.18
SEC4YFL005W SNF11P38956 169 aa1.43□□□□□ -2.18
SEC4YFL005W YAR029WP39549 74 aa1.43□□□□□ -2.18
SEC4YFL005W TDA2P40045 126 aa1.43□□□□□ -2.18
SEC4YFL005W GTT1P40582 234 aa1.43□□□□□ -2.18
SEC4YFL005W VMA21P41806 77 aa1.43□□□□□ -2.18
SEC4YFL005W YCL001W-AP87012 153 aa1.43□□□□□ -2.18
SEC4YFL005W FIT1Q04433 528 aa1.43□□□□□ -2.18
SEC4YFL005W MED11Q99278 115 aa1.43□□□□□ -2.18
SEC4YFL005W REV3P14284 1504 aa1.43□□□□□ -2.18
SEC4YFL005W PDR11P40550 1411 aa1.42□□□□□ -2.18
SEC4YFL005W SLH1P53327 1967 aaKnown RBP1.42□□□□□ -2.18
SEC4YFL005W SRL3P36167 246 aa1.42□□□□□ -2.18
SEC4YFL005W YEL014CP39999 101 aa1.42□□□□□ -2.18
SEC4YFL005W YFR035CP43608 114 aa1.42□□□□□ -2.18
SEC4YFL005W YMR103CQ04436 120 aa1.42□□□□□ -2.18
SEC4YFL005W GPI11Q06636 219 aa1.42□□□□□ -2.18
SEC4YFL005W YPR203WQ08994 102 aa1.42□□□□□ -2.18
SEC4YFL005W COA6Q3E846 104 aa1.42□□□□□ -2.18
SEC4YFL005W YLR365WQ7LIF2 110 aa1.42□□□□□ -2.18
SEC4YFL005W TRM732Q03496 1420 aa1.41□□□□□ -2.18
SEC4YFL005W RPL36BO14455 100 aaKnown RBP1.41□□□□□ -2.18
SEC4YFL005W RPL36AP05745 100 aaPredicted RBP1.41□□□□□ -2.18
SEC4YFL005W AIM18P38884 321 aa1.41□□□□□ -2.18
SEC4YFL005W DCV1P43595 202 aa1.41□□□□□ -2.18
SEC4YFL005W BRP1P53194 125 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms