RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W YEL073CP39974 107 aa1.25□□□□□ -2.21
CDC53YDL132W COF1Q03048 143 aaKnown RBP1.25□□□□□ -2.21
CDC53YDL132W EST3Q03096 181 aa1.25□□□□□ -2.21
CDC53YDL132W RNH202Q05635 350 aa1.25□□□□□ -2.21
CDC53YDL132W FIT2Q08906 153 aa1.25□□□□□ -2.21
CDC53YDL132W ATG41Q12048 136 aa1.25□□□□□ -2.21
CDC53YDL132W FCY1Q12178 158 aa1.25□□□□□ -2.21
CDC53YDL132W STF2P16965 84 aa1.25□□□□□ -2.21
CDC53YDL132W NRG2P38082 220 aa1.25□□□□□ -2.21
CDC53YDL132W BUD25P85052 153 aa1.25□□□□□ -2.21
CDC53YDL132W FMN1Q03778 218 aa1.25□□□□□ -2.21
CDC53YDL132W YMR320WQ04897 101 aa1.25□□□□□ -2.21
CDC53YDL132W UPS1Q05776 175 aa1.25□□□□□ -2.21
CDC53YDL132W RRT7Q07829 113 aa1.25□□□□□ -2.21
CDC53YDL132W YOR015WQ12169 119 aa1.25□□□□□ -2.21
CDC53YDL132W MRPL24P36525 258 aaPredicted RBP1.24□□□□□ -2.21
CDC53YDL132W PRS3P38689 320 aaKnown RBP1.24□□□□□ -2.21
CDC53YDL132W YEL067CP39978 195 aa1.24□□□□□ -2.21
CDC53YDL132W PEP8P40335 379 aa1.24□□□□□ -2.21
CDC53YDL132W DML1Q03652 475 aa1.24□□□□□ -2.21
CDC53YDL132W YHR007C-AQ07074 71 aa1.24□□□□□ -2.21
CDC53YDL132W FAS1P07149 2051 aaKnown RBP1.24□□□□□ -2.21
CDC53YDL132W GPA2P10823 449 aa1.24□□□□□ -2.21
CDC53YDL132W NHP6AP11632 93 aaKnown RBP1.24□□□□□ -2.21
CDC53YDL132W YKR045CP36138 183 aa1.24□□□□□ -2.21
CDC53YDL132W YBR219CP38317 127 aa1.24□□□□□ -2.21
CDC53YDL132W NSE4P43124 402 aa1.24□□□□□ -2.21
CDC53YDL132W POP3P53833 195 aaPredicted RBP1.24□□□□□ -2.21
CDC53YDL132W CSN9Q03981 162 aa1.24□□□□□ -2.21
CDC53YDL132W BOL1Q3E793 110 aa1.24□□□□□ -2.21
CDC53YDL132W PHO85P17157 305 aa1.23□□□□□ -2.21
CDC53YDL132W TMA19P35691 167 aaKnown RBP1.23□□□□□ -2.21
CDC53YDL132W YGR039WP53225 103 aa1.23□□□□□ -2.21
CDC53YDL132W YML079WQ03629 201 aa1.23□□□□□ -2.21
CDC53YDL132W YOR381W-AQ3E804 55 aa1.23□□□□□ -2.21
CDC53YDL132W SEN2P16658 377 aa1.23□□□□□ -2.21
CDC53YDL132W AHT1P29589 182 aa1.23□□□□□ -2.21
CDC53YDL132W THG1P53215 237 aaKnown RBP1.23□□□□□ -2.21
CDC53YDL132W DYN2Q02647 92 aa1.23□□□□□ -2.21
CDC53YDL132W YDL157CQ12082 118 aa1.23□□□□□ -2.21
CDC53YDL132W PRP8P33334 2413 aaKnown RBP1.22□□□□□ -2.21
CDC53YDL132W QCR8P08525 94 aa1.22□□□□□ -2.21
CDC53YDL132W YGL041W-AP0C5N3 154 aa1.22□□□□□ -2.21
CDC53YDL132W YOL162WP0CF19 215 aa1.22□□□□□ -2.21
CDC53YDL132W YHR140WP38842 239 aa1.22□□□□□ -2.21
CDC53YDL132W YGR269WP40326 108 aa1.22□□□□□ -2.21
CDC53YDL132W YMR321CQ04898 105 aa1.22□□□□□ -2.21
CDC53YDL132W YPR114WQ06107 315 aa1.22□□□□□ -2.21
CDC53YDL132W SLO1Q3E784 85 aa1.22□□□□□ -2.21
CDC53YDL132W MDM35O60200 86 aa1.21□□□□□ -2.22
CDC53YDL132W RPS20P38701 121 aaKnown RBP1.21□□□□□ -2.22
CDC53YDL132W CIN5P40917 295 aa1.21□□□□□ -2.22
CDC53YDL132W YDR524C-BQ3E6R4 66 aa1.21□□□□□ -2.22
CDC53YDL132W YNL277W-AQ3E7Z0 62 aa1.21□□□□□ -2.22
CDC53YDL132W RIF1P29539 1916 aa1.21□□□□□ -2.22
CDC53YDL132W HSP12P22943 109 aaKnown RBP1.21□□□□□ -2.22
CDC53YDL132W AYR1P40471 297 aa1.21□□□□□ -2.22
CDC53YDL132W ALB1P47019 175 aaPredicted RBP1.21□□□□□ -2.22
CDC53YDL132W GEP7P53171 287 aa1.21□□□□□ -2.22
CDC53YDL132W DAD4P69851 72 aa1.21□□□□□ -2.22
CDC53YDL132W YDR102CQ03864 110 aa1.21□□□□□ -2.22
CDC53YDL132W YHP1Q04116 353 aa1.21□□□□□ -2.22
CDC53YDL132W ATG10Q07879 167 aa1.21□□□□□ -2.22
CDC53YDL132W RPC19P28000 142 aaKnown RBP1.2□□□□□ -2.22
CDC53YDL132W YPT31P38555 223 aaKnown RBP1.2□□□□□ -2.22
CDC53YDL132W EMC4P53073 190 aa1.2□□□□□ -2.22
CDC53YDL132W MET31Q03081 177 aa1.2□□□□□ -2.22
CDC53YDL132W MEC1P38111 2368 aa1.2□□□□□ -2.22
CDC53YDL132W MRS4P23500 304 aa1.2□□□□□ -2.22
CDC53YDL132W YRA2P36036 203 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
CDC53YDL132W TIM8P57744 87 aa1.2□□□□□ -2.22
CDC53YDL132W ATP19P81451 68 aa1.2□□□□□ -2.22
CDC53YDL132W ELP6Q04868 273 aa1.2□□□□□ -2.22
CDC53YDL132W YDL241WQ07738 123 aa1.2□□□□□ -2.22
CDC53YDL132W UTP20P35194 2493 aaKnown RBP1.2□□□□□ -2.22
CDC53YDL132W HFA1P32874 2273 aa1.2□□□□□ -2.22
CDC53YDL132W CCS1P40202 249 aaKnown RBP1.19□□□□□ -2.22
CDC53YDL132W PAC10P48363 199 aa1.19□□□□□ -2.22
CDC53YDL132W YNL019CP53975 284 aa1.19□□□□□ -2.22
CDC53YDL132W KEI1Q06346 221 aa1.19□□□□□ -2.22
CDC53YDL132W CSI2Q08054 341 aa1.19□□□□□ -2.22
CDC53YDL132W YMR030W-AQ3E760 96 aa1.19□□□□□ -2.22
CDC53YDL132W SPS2P08459 502 aa1.19□□□□□ -2.22
CDC53YDL132W DDR48P18899 430 aaKnown RBP1.19□□□□□ -2.22
CDC53YDL132W SHB17P36136 271 aaKnown RBP1.19□□□□□ -2.22
CDC53YDL132W GLC8P41818 229 aa1.19□□□□□ -2.22
CDC53YDL132W APS3P47064 194 aa1.19□□□□□ -2.22
CDC53YDL132W SPG1P50088 95 aa1.19□□□□□ -2.22
CDC53YDL132W RCF2P53721 224 aa1.19□□□□□ -2.22
CDC53YDL132W POL2P21951 2222 aaKnown RBP1.19□□□□□ -2.22
CDC53YDL132W RAD50P12753 1312 aa1.18□□□□□ -2.22
CDC53YDL132W FMP49A0A023PZB3 126 aa1.18□□□□□ -2.22
CDC53YDL132W MPM1P40364 252 aa1.18□□□□□ -2.22
CDC53YDL132W YLR162WQ06235 118 aa1.18□□□□□ -2.22
CDC53YDL132W LAA1P39526 2014 aa1.18□□□□□ -2.22
CDC53YDL132W INO4P13902 151 aa1.18□□□□□ -2.22
CDC53YDL132W RPB7P34087 171 aa1.18□□□□□ -2.22
CDC53YDL132W MZM1Q03429 123 aaPredicted RBP1.18□□□□□ -2.22
CDC53YDL132W RCE1Q03530 315 aa1.18□□□□□ -2.22
CDC53YDL132W SDH7Q04401 133 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms