RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 IGFBP4P22692 258 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ROR1Q01973 937 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 BST2Q10589 180 aaKnown RBP13.72□□□□□ -0.21
PHGDH-220ENST00000641570 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 SLC8B1Q6J4K2 584 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 FAM35AQ86V20 835 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 PASD1Q8IV76 773 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 UBR7Q8N806 425 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 MRPL43Q8N983 215 aaKnown RBP13.72□□□□□ -0.21
PHGDH-220ENST00000641570 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 GOLGA1Q92805 767 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 VN1R3Q9BXE9 311 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 GPR88Q9GZN0 384 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
PHGDH-220ENST00000641570 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 TRIP11Q15643 1979 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 HCRTO43612 131 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 ATP2C2O75185 946 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 MICAL2O94851 1124 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 NPR3P17342 541 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 BDNFP23560 247 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 CLCN1P35523 988 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 PRKCIP41743 596 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 ERVFC1P60507 584 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 CNGA2Q16280 664 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 MEA1Q16626 185 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-220ENST00000641570 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 SIX6OS1Q8N1H7 587 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 TC2NQ8N9U0 490 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 TRIM11Q96F44 468 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 KLHL5Q96PQ7 755 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 HNRNPABQ99729 332 aaKnown RBP13.71□□□□□ -0.21
PHGDH-220ENST00000641570 ZNF518BQ9C0D4 1074 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 NSUN3Q9H649 340 aaKnown RBP13.71□□□□□ -0.21
PHGDH-220ENST00000641570 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-220ENST00000641570 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHGDH-220ENST00000641570 IRAK3Q9Y616 596 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 CEP290O15078 2479 aa13.71□□□□□ -0.21
PHGDH-220ENST00000641570 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 O00370 1275 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 FSCN2O14926 492 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 MMEP08473 750 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
PHGDH-220ENST00000641570 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
PHGDH-220ENST00000641570 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
PHGDH-220ENST00000641570 ACADSBP45954 432 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 EPHB3P54753 998 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 MAP3K7CLP57077 242 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 RAB33AQ14088 237 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 PPM1LQ5SGD2 360 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 RBM23Q86U06 439 aaKnown RBP13.7□□□□□ -0.22
PHGDH-220ENST00000641570 NOP9Q86U38 636 aaKnown RBP13.7□□□□□ -0.22
PHGDH-220ENST00000641570 ITIH5Q86UX2 942 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 TMEM209Q96SK2 561 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
PHGDH-220ENST00000641570 SCN1AP35498 2009 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 PDE4DIPQ5VU43 2346 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 WDR27A2RRH5 827 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 ANKRD62A6NC57 917 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 CLDN5O00501 218 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 XYLBO75191 536 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 CALB1P05937 261 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms