RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SENP8Q96LD8 212 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 FAM193BQ96PV7 902 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-219ENST00000641513 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 FTHL17Q9BXU8 183 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 DPEP3Q9H4B8 488 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 RGS18Q9NS28 235 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 PARVAQ9NVD7 372 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 GDAP2Q9NXN4 497 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 SMARCAL1Q9NZC9 954 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 STXBP5LQ9Y2K9 1186 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 MYO16Q9Y6X6 1858 aa9.36□□□□□ -0.91
PHGDH-219ENST00000641513 PTPRDP23468 1912 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 SRRM3A6NNA2 597 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 C9IYK1 514 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 O00370 1275 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 PIK3R2O00459 728 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 HCRTO43612 131 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 NBNO60934 754 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 EOMESO95936 686 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 FGFR1P11362 822 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 MMP8P22894 467 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ACAT1P24752 427 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ADORA2BP29275 332 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 CDH5P33151 784 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ACTN2P35609 894 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 RGS7P49802 495 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 TTC3P53804 2025 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 CCL23P55773 120 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 PSMC1P62191 440 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 RNASELQ05823 741 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 TUSC3Q13454 348 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 CUL1Q13616 776 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 TRIM60Q495X7 471 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 PAN2Q504Q3 1202 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 PPP1R26Q5T8A7 1209 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 EMC10Q5UCC4 262 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 WSCD1Q658N2 575 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 LCLAT1Q6UWP7 414 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 RTN4RL1Q86UN2 441 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 METTL23Q86XA0 190 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ABI1Q8IZP0 508 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 RASGEF1CQ8N431 466 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 WDTC1Q8N5D0 677 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 DBF4BQ8NFT6 615 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 FEZF2Q8TBJ5 459 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 HASPINQ8TF76 798 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 KBTBD7Q8WVZ9 684 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 LINC01599Q8WXQ3 324 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 C18orf8Q96DM3 657 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
PHGDH-219ENST00000641513 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 SCLYQ96I15 445 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 TNIP3Q96KP6 325 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 MED10Q9BTT4 135 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 TSPYL1Q9H0U9 437 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 VPS18Q9P253 973 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 ATP11BQ9Y2G3 1177 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 PCDHB7Q9Y5E2 793 aa9.35□□□□□ -0.91
PHGDH-219ENST00000641513 NLRC5Q86WI3 1866 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 ZNF638Q14966 1978 aaKnown RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 MIF4GDA9UHW6 222 aaKnown RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 I3L4J1 428 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PITPNM1O00562 1244 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 DDX3YO15523 660 aaKnown RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 RNF40O75150 1001 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 B3GAT3O94766 335 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 SYF2O95926 243 aaKnown RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 ODC1P11926 461 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 CCDC130P13994 396 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 IGFBP6P24592 240 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 LMO2P25791 158 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 GJC1P36383 396 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 TNNT3P45378 269 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-219ENST00000641513 LBX1P52954 281 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 TLE2Q04725 743 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PDCLQ13371 301 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 MAMLD1Q13495 774 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PTPN20Q4JDL3 420 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PLEKHG4Q58EX7 1191 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 NOMO2Q5JPE7 1267 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 SEL1L2Q5TEA6 688 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 OR6B2Q6IFH4 312 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 LEKR1Q6ZMV7 388 aa9.34□□□□□ -0.91
PHGDH-219ENST00000641513 DEFB128Q7Z7B8 93 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms