RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 RTP2Q5QGT7 225 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 KIAA1841Q6NSI8 718 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 PHF13Q86YI8 300 aaPredicted RBP21■□□□□ 0.95
PHGDH-210ENST00000641115 RNF168Q8IYW5 571 aaPredicted RBP21■□□□□ 0.95
PHGDH-210ENST00000641115 FUKQ8N0W3 1084 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 ANKRD52Q8NB46 1076 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 UBA3Q8TBC4 463 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 SECISBP2LQ93073 1101 aaKnown RBP21■□□□□ 0.95
PHGDH-210ENST00000641115 PCED1BQ96HM7 432 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 OXCT2Q9BYC2 517 aaPredicted RBP21■□□□□ 0.95
PHGDH-210ENST00000641115 THAP2Q9H0W7 228 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 STK39Q9UEW8 545 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 GUCA1BQ9UMX6 200 aa21■□□□□ 0.95
PHGDH-210ENST00000641115 OR6C75A6NL08 312 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 ZNF500O60304 480 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-210ENST00000641115 SOD2P04179 222 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 SETSIPP0DME0 302 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 GPD2P43304 727 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 PLCB3Q01970 1234 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 BST2Q10589 180 aaKnown RBP20.99■□□□□ 0.95
PHGDH-210ENST00000641115 MRPL58Q14197 206 aaKnown RBP20.99■□□□□ 0.95
PHGDH-210ENST00000641115 CCDC142Q17RM4 750 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 FAM171BQ6P995 826 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 MON1BQ7L1V2 547 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 TTC30AQ86WT1 665 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 DCP1BQ8IZD4 617 aaKnown RBP20.99■□□□□ 0.95
PHGDH-210ENST00000641115 MCOLN2Q8IZK6 566 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 WDTC1Q8N5D0 677 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 ZNF653Q96CK0 615 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 C11orf70Q9BRQ4 267 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 UBE2OQ9C0C9 1292 aaKnown RBP20.99■□□□□ 0.95
PHGDH-210ENST00000641115 ADAM22Q9P0K1 906 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 TRIM10Q9UDY6 481 aa20.99■□□□□ 0.95
PHGDH-210ENST00000641115 MYBL1P10243 752 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 MMP8P22894 467 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 GPC5P78333 572 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 KRT17Q04695 432 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 C1QBPQ07021 282 aaKnown RBP20.98■□□□□ 0.95
PHGDH-210ENST00000641115 PKDCCQ504Y2 493 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 MMS22LQ6ZRQ5 1243 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 TAS1R1Q7RTX1 841 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 DDX53Q86TM3 631 aaKnown RBP20.98■□□□□ 0.95
PHGDH-210ENST00000641115 ERICH1Q86X53 443 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 MYLPFQ96A32 169 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 VCPIP1Q96JH7 1222 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 TMEM209Q96SK2 561 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 PKMYT1Q99640 499 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 HERC2P3Q9BVR0 1158 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 VN1R3Q9BXE9 311 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 B3GNT5Q9BYG0 378 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 ZCWPW1Q9H0M4 648 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 RWDD3Q9Y3V2 267 aa20.98■□□□□ 0.95
PHGDH-210ENST00000641115 PTPRDP23468 1912 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 LCHNA4D1U4 455 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 BTNL10A8MVZ5 291 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 CALB1P05937 261 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 LINC00271P0C7V0 271 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 FAM200BP0CF97 657 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 PDCLQ13371 301 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 LIN9Q5TKA1 542 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 C4orf50Q6ZRC1 276 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 FAM35AQ86V20 835 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 IPO4Q8TEX9 1081 aaKnown RBP20.97■□□□□ 0.95
PHGDH-210ENST00000641115 RIN2Q8WYP3 895 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-210ENST00000641115 SYNCQ9H7C4 482 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 CHST7Q9NS84 486 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 KRT82Q9NSB4 513 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 DUSP10Q9Y6W6 482 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 NCANO14594 1321 aa20.97■□□□□ 0.95
PHGDH-210ENST00000641115 MACROD2A1Z1Q3 448 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CLDN5O00501 218 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CAPN15O75808 1086 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 FGF18O76093 207 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 ABL1P00519 1130 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 GLUD2P49448 558 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 RABGGTBP53611 331 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PDE4CQ08493 712 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PTPN14Q15678 1187 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 NFE2Q16621 373 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 SLC39A12Q504Y0 691 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 SPATA2LQ8IUW3 424 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PIK3R5Q8WYR1 880 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 RFFLQ8WZ73 363 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 SMARCD1Q96GM5 515 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 C16orf45Q96MC5 204 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 DUSP16Q9BY84 665 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 MIS12Q9H081 205 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 ST7Q9NRC1 585 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CNOT8Q9UFF9 292 aaKnown RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CYTH4Q9UIA0 394 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 STRIP2Q9ULQ0 834 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PLXNA4Q9HCM2 1894 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 A0A0A6YYK5 440 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 KIF5CO60282 957 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 URODP06132 367 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 OR4Q2P0C623 313 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CPB1P15086 417 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 NPR3P17342 541 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CTNNB1P35222 781 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 NAP1L1P55209 391 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms