RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 SIT1Q9Y3P8 196 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 ZFP37Q9Y6Q3 630 aaPredicted RBP12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 CACNA1IQ9P0X4 2223 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 CCL16O15467 120 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 AKR1B10O60218 316 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 LMNAP02545 664 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 THP07101 528 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 C8AP07357 584 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 SP9P0CG40 484 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 FGFR3P22607 806 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 HOXA9P31269 272 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 STAT1P42224 750 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ID4P47928 161 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 GCLMP48507 274 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 KIF11P52732 1056 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 PPP3CAQ08209 521 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 PSMD6Q15008 389 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 KRT39Q6A163 491 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 POTEHQ6S545 545 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 RSPO2Q6UXX9 243 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 SYT10Q6XYQ8 523 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ZNF662Q6ZS27 426 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 KIAA1328Q86T90 577 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 TXLNBQ8N3L3 684 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ITFG1Q8TB96 612 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 CCDC127Q96BQ5 260 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 ACO2Q99798 780 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 DDX23Q9BUQ8 820 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 TMEM8AQ9HCN3 771 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 HCFC1R1Q9NWW0 138 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 APEX2Q9UBZ4 518 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
ERGIC3-220ENST00000640748 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 A0A0B4J269 797 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 ACKR2O00590 384 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 KIF5CO60282 957 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 TOM1L1O75674 476 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 LCA5LO95447 670 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 POU2F2P09086 479 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 FERP16591 822 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 JAM2P57087 298 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 GNG11P61952 73 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 RAB33AQ14088 237 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 PPM1LQ5SGD2 360 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 LIN9Q5TKA1 542 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 HGSNATQ68CP4 663 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 C1orf210Q8IVY1 113 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 PPP1R10Q96QC0 940 aaKnown RBP12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 FNBP1Q96RU3 617 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 STK33Q9BYT3 514 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 HAUS4Q9H6D7 363 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.37
ERGIC3-220ENST00000640748 CEP250Q9BV73 2442 aa12.71□□□□□ -0.38
ERGIC3-220ENST00000640748 ANK1P16157 1881 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 TMEM189-UBE2V1I3L0A0 370 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 CLDN3O15551 220 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 ANXA13P27216 316 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 CASQ1P31415 396 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 OR1D2P34982 312 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 PRKCIP41743 596 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 VAV2P52735 878 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 GJB7Q6PEY0 223 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 NPAS3Q8IXF0 933 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 C3orf58Q8NDZ4 430 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 LMO3Q8TAP4 145 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 RMDN1Q96DB5 314 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 TCHPQ9BT92 498 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 LUC7LQ9NQ29 371 aaKnown RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 MYO1AQ9UBC5 1043 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 MTRRQ9UBK8 725 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms