RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 LRRC6Q86X45 466 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 ACTL9Q8TC94 416 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 MARCOQ9UEW3 520 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 PPME1Q9Y570 386 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 ROBO3Q96MS0 1386 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 E5RI56 91 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 ACKR2O00590 384 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 NVLO15381 856 aaKnown RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 GEMIN4P57678 1058 aaKnown RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 DLG4P78352 724 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 SPOCD1Q6ZMY3 1216 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 PPHLN1Q8NEY8 458 aaKnown RBP18.34■□□□□ 0.53
SCARB2-223ENST00000640640 IL31RAQ8NI17 732 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 BAP1Q92560 729 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 OSMRQ99650 979 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 TMEM121Q9BTD3 319 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 TMBIM4Q9HC24 238 aa18.34■□□□□ 0.53
SCARB2-223ENST00000640640 F8W8V4 182 aa18.33■□□□□ 0.53
SCARB2-223ENST00000640640 CES2O00748 559 aa18.33■□□□□ 0.53
SCARB2-223ENST00000640640 CAND2O75155 1236 aa18.33■□□□□ 0.53
SCARB2-223ENST00000640640 ATICP31939 592 aa18.33■□□□□ 0.53
SCARB2-223ENST00000640640 FGD4Q96M96 766 aa18.33■□□□□ 0.53
SCARB2-223ENST00000640640 XAB2Q9HCS7 855 aaKnown RBP18.33■□□□□ 0.53
SCARB2-223ENST00000640640 MTSS1O43312 755 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 HMBSP08397 361 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ZNF286BP0CG31 522 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 PYGMP11217 842 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ECM1Q16610 540 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ANO4Q32M45 955 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 FAM172AQ8WUF8 416 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ERP27Q96DN0 273 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 VCPIP1Q96JH7 1222 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 FRMD8P1Q9BZ68 369 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-223ENST00000640640 GBA2Q9HCG7 927 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-223ENST00000640640 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 ADM5C9JUS6 153 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 GTF2BQ00403 316 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 SHROOM1Q2M3G4 852 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-223ENST00000640640 HABP4Q5JVS0 413 aaKnown RBP18.33■□□□□ 0.52
SCARB2-223ENST00000640640 USP18Q9UMW8 372 aa18.33■□□□□ 0.52
SCARB2-223ENST00000640640 RGPD8O14715 1765 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-223ENST00000640640 PSMD3O43242 534 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 SPRP35270 261 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 RGS2P41220 211 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 OR1G1P47890 313 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 HSP90AA5PQ58FG0 334 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 DCP1BQ8IZD4 617 aaKnown RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 EPS8L1Q8TE68 723 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 RXFP2Q8WXD0 754 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 N4BP2L2Q92802 583 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 SEMA4AQ9H3S1 761 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PRG3Q9Y2Y8 225 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 DNAJC3Q13217 504 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 COBLL1Q53SF7 1204 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 KRT80Q6KB66 452 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 CDC26Q8NHZ8 85 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 MYCBPAPQ8TBZ2 947 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 GLT1D1Q96MS3 346 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 KCTD10Q9H3F6 313 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 RCCD1A6NED2 376 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 TRPA1O75762 1119 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 AP1G2O75843 785 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 BCAT1P54687 386 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PDK2Q15119 407 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 ICE2Q659A1 982 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 ZNF669Q96BR6 464 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 GANQ9H2C0 597 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PDE2AO00408 941 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PTGER2P43116 358 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 IL1RL1Q01638 556 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 USP10Q14694 798 aaKnown RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 TFB1MQ8WVM0 346 aaKnown RBP18.32■□□□□ 0.52
SCARB2-223ENST00000640640 PTPRN2Q92932 1015 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 GPATCH2LQ9NWQ4 482 aa18.32■□□□□ 0.52
SCARB2-223ENST00000640640 TRIM49D1C9J1S8 452 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 GSTA4O15217 222 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 KRT4P19013 534 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
SCARB2-223ENST00000640640 KDSRQ06136 332 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 STAMBPL1Q96FJ0 436 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 ASIC4Q96FT7 647 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 ASB7Q9H672 318 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 STRNO43815 780 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 ATP9AO75110 1047 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 MCF2P10911 925 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 HNRNPH3P31942 346 aaKnown RBP18.31■□□□□ 0.52
SCARB2-223ENST00000640640 PPATQ06203 517 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 MROH9Q5TGP6 573 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 SLC9A9Q8IVB4 645 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 ELMOD1Q8N336 334 aa18.31■□□□□ 0.52
SCARB2-223ENST00000640640 PORCNQ9H237 461 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms