RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 RBM20Q5T481 1227 aaKnown RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 BROXQ5VW32 411 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ANO7Q6IWH7 933 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 DAAM2Q86T65 1068 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 DCBLD1Q8N8Z6 715 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 TMIEQ8NEW7 156 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ABHD11Q8NFV4 315 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 OSR1Q8TAX0 266 aaPredicted RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 CCHCR1Q8TD31 782 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ADAMTS18Q8TE60 1221 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 PNISRQ8TF01 805 aaKnown RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 FBXO41Q8TF61 875 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 MAP4K1Q92918 833 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ATP2A3Q93084 1043 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 MED30Q96HR3 178 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ACAP3Q96P50 834 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 FYTTD1Q96QD9 318 aaKnown RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 MMS19Q96T76 1030 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 DNAJC7Q99615 494 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 SMOQ99835 787 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 C1QTNF5Q9BXJ0 243 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 IMPG2Q9BZV3 1241 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 MANSC1Q9H8J5 431 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 ZNF556Q9HAH1 456 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 SPTLC3Q9NUV7 552 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 NCKIPSDQ9NZQ3 722 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 MAGEC2Q9UBF1 373 aaPredicted RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 PCDHA7Q9UN72 937 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 EDARQ9UNE0 448 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 PTCH2Q9Y6C5 1203 aa0.82□□□□□ -2.28
VPS35-212ENST00000640313 MYBBP1AQ9BQG0 1328 aaKnown RBP0.82□□□□□ -2.28
VPS35-212ENST00000640313 A0A0B4J293 547 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 A0A1B0GUV1 79 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 A0A1W2PNU3 283 aaPredicted RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 FAM171A2A8MVW0 826 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 E9PLN8 166 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 POLRMTO00411 1230 aaKnown RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 GRM6O15303 877 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 EXOC3O60645 756 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 STK10O94804 968 aaKnown RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 BAG4O95429 457 aaKnown RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 PDHA1P08559 390 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SBK3P0C264 359 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 MTHFD2P13995 350 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 CD19P15391 556 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 TCF3P15923 654 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 CD6P30203 668 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 RENBPP51606 427 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 KRTAP10-1P60331 282 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 GPSM2P81274 684 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 TCF15Q12870 199 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 MALLQ13021 153 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SERINC3Q13530 473 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 CCDC6Q16204 474 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 FAM187BQ17R55 369 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.81□□□□□ -2.28
VPS35-212ENST00000640313 MUM1Q2TAK8 710 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 FLYWCH1Q4VC44 716 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 MANEAQ5SRI9 462 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 CEP85LQ5SZL2 805 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 VPS53Q5VIR6 699 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SFRP4Q6FHJ7 346 aaPredicted RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 NADSYN1Q6IA69 706 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SERPINA13PQ6UXR4 307 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 Q6ZWC4 215 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 ZNF365Q70YC5 407 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 KCNK18Q7Z418 384 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SH2D6Q7Z4S9 175 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 ARHGAP30Q7Z6I6 1101 aaPredicted RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 LIX1LQ8IVB5 337 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SFTPA1Q8IWL2 248 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SLC15A3Q8IY34 581 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 FBXL14Q8N1E6 418 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SLC17A8Q8NDX2 589 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 LMO3Q8TAP4 145 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SH3TC2Q8TF17 1288 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 IGFBPL1Q8WX77 278 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 AUTS2Q8WXX7 1259 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 NEUROG1Q92886 237 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SCAMP4Q969E2 229 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SLC25A28Q96A46 364 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 MIB2Q96AX9 1013 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 NLRP4Q96MN2 994 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 GPR101Q96P66 508 aaPredicted RBP0.81□□□□□ -2.28
VPS35-212ENST00000640313 DEPDC7Q96QD5 511 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 VKORC1Q9BQB6 163 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 TUBB6Q9BUF5 446 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 ADI1Q9BV57 179 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 MYLK2Q9H1R3 596 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 SMOC2Q9H3U7 446 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 RMI1Q9H9A7 625 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 IFT122Q9HBG6 1241 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 PLSCR4Q9NRQ2 329 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 ETAA1Q9NY74 926 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 KCNG2Q9UJ96 466 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 GABRQQ9UN88 632 aa0.81□□□□□ -2.28
VPS35-212ENST00000640313 ANTXRLA6NF34 631 aa0.8□□□□□ -2.28
VPS35-212ENST00000640313 DDNO94850 711 aaPredicted RBP0.8□□□□□ -2.28
VPS35-212ENST00000640313 PDE8BO95263 885 aa0.8□□□□□ -2.28
VPS35-212ENST00000640313 DLDP09622 509 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms