RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 PPP1R2P3Q6NXS1 205 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 XYLT1Q86Y38 959 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 ANKMY2Q8IV38 441 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 SUGP1Q8IWZ8 645 aaKnown RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 EXOC8Q8IYI6 725 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 ACTL9Q8TC94 416 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 PRCCQ92733 491 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 NKD2Q969F2 451 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 MMP19Q99542 508 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 WDR83Q9BRX9 315 aaKnown RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 C2orf40Q9H1Z8 148 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 CXCL16Q9H2A7 254 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 RPF1Q9H9Y2 349 aaKnown RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 KLC4Q9NSK0 619 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 SAMD15Q9P1V8 674 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 PCSK1NQ9UHG2 260 aa9.85□□□□□ -0.83
NECAP1-225ENST00000640209 DRG1Q9Y295 367 aaKnown RBP9.85□□□□□ -0.83
NECAP1-225ENST00000640209 POC1B-GALNT4F8VUJ3 575 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CST8O60676 142 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CDH16O75309 829 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 MICAL2O94851 1124 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 STAG3L1P0CL83 205 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 GHRP10912 638 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CYP3A5P20815 502 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CETN2P41208 172 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 YWHAEP62258 255 aaKnown RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 STAT4Q14765 748 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 SURF1Q15526 300 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 FNBP1LQ5T0N5 605 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ICE2Q659A1 982 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 MAP1SQ66K74 1059 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 NUGGCQ68CJ6 796 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 TRNP1Q6NT89 227 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 FUKQ8N0W3 1084 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 UBA3Q8TBC4 463 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 PIWIL1Q96J94 861 aaKnown RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CD248Q9HCU0 757 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 GRID1Q9ULK0 1009 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 SLC12A4Q9UP95 1085 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 TNFSF13BQ9Y275 285 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 CLUHO75153 1309 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 A0A087WZ62 844 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 EXOC1LA0A1B0GW35 172 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 RASA4BC9J798 803 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 RASA4O43374 803 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ITGAVP06756 1048 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ABHD2P08910 425 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 KDELR1P24390 212 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 GPX6P59796 221 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 COPS2P61201 443 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 LMNB2Q03252 620 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 PDIA2Q13087 525 aaKnown RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ZNF667Q5HYK9 610 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 DPH6Q7L8W6 267 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 TRPM8Q7Z2W7 1104 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 UNC45BQ8IWX7 931 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ZBED8Q8IZ13 594 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 PEBP4Q96S96 227 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 FDXACB1Q9BRP7 624 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 LHX5Q9H2C1 402 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 DDX56Q9NY93 547 aaKnown RBP9.84□□□□□ -0.83
NECAP1-225ENST00000640209 AGTPBP1Q9UPW5 1226 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 PPME1Q9Y570 386 aa9.84□□□□□ -0.83
NECAP1-225ENST00000640209 ALOX15BO15296 676 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 GAS2O43903 313 aaKnown RBP9.83□□□□□ -0.84
NECAP1-225ENST00000640209 CILPO75339 1184 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 UBOX5O94941 541 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 SLC25A27O95847 323 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 VTNP04004 478 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 INSRRP14616 1297 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 TAC1P20366 129 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 ATP5DP30049 168 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 MIPP30301 263 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 TAP1Q03518 808 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 MGAT5Q09328 741 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 MMRN1Q13201 1228 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 MORF4L2Q15014 288 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 TAZQ16635 292 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 SLC10A6Q3KNW5 377 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 CYB5D1Q6P9G0 228 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 TRABD2AQ86V40 505 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 FAM228AQ86W67 206 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 ERO1BQ86YB8 467 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 SULF1Q8IWU6 871 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 ANKS4BQ8N8V4 417 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 CPT1BQ92523 772 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 DCPSQ96C86 337 aaKnown RBP9.83□□□□□ -0.84
NECAP1-225ENST00000640209 TGS1Q96RS0 853 aaKnown RBP9.83□□□□□ -0.84
NECAP1-225ENST00000640209 SMARCAD1Q9H4L7 1026 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 VPS37BQ9H9H4 285 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 PCDH9Q9HC56 1237 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 USP15Q9Y4E8 981 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-225ENST00000640209 FARP1Q9Y4F1 1045 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-225ENST00000640209 CEP83Q9Y592 693 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 A0A1W2PPM1 405 aa9.83□□□□□ -0.84
NECAP1-225ENST00000640209 HGSO14964 777 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms