RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TWF2Q6IBS0 349 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TOGARAM2Q6ZUX3 1019 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SPATS2Q86XZ4 545 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 FNBP1Q96RU3 617 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 POP1Q99575 1024 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 CCDC94Q9BW85 323 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 IFIH1Q9BYX4 1025 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TRIM6Q9C030 488 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 WNT8AQ9H1J5 351 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 NXF3Q9H4D5 531 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 RPF1Q9H9Y2 349 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TOPORSQ9NS56 1045 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SIK3Q9Y2K2 1263 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 HES2Q9Y543 173 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SCN5AQ14524 2016 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 ITIH6Q6UXX5 1313 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 GTPBP10A4D1E9 387 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 STX10O60499 249 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 MGEA5O60502 916 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 NBNO60934 754 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 PGRP06401 933 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 CLTBP09497 229 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 GTF2H1P32780 548 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 GCLMP48507 274 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 MYL7Q01449 175 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SURF1Q15526 300 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 C1QTNF12Q5T7M4 302 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TMC6Q7Z403 805 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 ZSCAN30Q86W11 494 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SPC24Q8NBT2 197 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 ACAP3Q96P50 834 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 CGRRF1Q99675 332 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 CRACR2AQ9BSW2 395 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 DHRS4Q9BTZ2 278 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TMEM117Q9H0C3 514 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 MIR1-1HGQ9H1L0 117 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 EPN3Q9H201 632 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 MMRN2Q9H8L6 949 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TMEM8AQ9HCN3 771 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 LUC7LQ9NQ29 371 aaKnown RBP8.55□□□□□ -1.04
SCARB2-220ENST00000640076 TMEM39AQ9NV64 488 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 IPPQ9Y573 584 aa8.55□□□□□ -1.04
SCARB2-220ENST00000640076 RALGAPA2Q2PPJ7 1873 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 TTC26A0AVF1 554 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 PMM2O15305 246 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 P4HA2O15460 535 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 N4BP1O75113 896 aaKnown RBP8.54□□□□□ -1.04
SCARB2-220ENST00000640076 RNASEH2AO75792 299 aaKnown RBP8.54□□□□□ -1.04
SCARB2-220ENST00000640076 IL18RAPO95256 599 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 TNNI1P19237 187 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 CYP2C18P33260 490 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 KLK7P49862 253 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 MXI1P50539 228 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 CCL23P55773 120 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 KCNMA1Q12791 1236 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 LONRF1Q17RB8 773 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-220ENST00000640076 C15orf39Q6ZRI6 1047 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 WDR49Q8IV35 697 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 AHI1Q8N157 1196 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 CNTD1Q8N815 330 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 OR5B17Q8NGF7 314 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 FAM84AQ96KN4 292 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 ADAM2Q99965 735 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 SELENOOQ9BVL4 669 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 PLCB1Q9NQ66 1216 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
SCARB2-220ENST00000640076 PCDHB5Q9Y5E4 795 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 PCDHB2Q9Y5E7 798 aa8.54□□□□□ -1.04
SCARB2-220ENST00000640076 ALPK3Q96L96 1907 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 A0A0U1RQF3 1178 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 LACTBL1A8MY62 500 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 ZNF623O75123 536 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 PAGE1O75459 146 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 RECQL4O94761 1208 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 CXCL10P02778 98 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 RRM1P23921 792 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 AKAP5P24588 427 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TBX2Q13207 712 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 MAP7Q14244 749 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 EXOC3L4Q17RC7 722 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 ZACNQ401N2 412 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 KRT39Q6A163 491 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 GBP6Q6ZN66 633 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 EFCAB13Q8IY85 973 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 CCDC116Q8IYX3 515 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 CCDC89Q8N998 374 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 SCLYQ96I15 445 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 SNX27Q96L92 541 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TCF12Q99081 682 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 APOL6Q9BWW8 343 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms