RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 VIPAS39Q9H9C1 493 aa12.93□□□□□ -0.34
CACNA1D-228ENST00000638120 METTL5Q9NRN9 209 aaKnown RBP12.93□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
CACNA1D-228ENST00000638120 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM187AA6NFU0 413 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 F8VP50 259 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 THP07101 528 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 RARAP10276 462 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 GRK4P32298 578 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 RFC1P35251 1148 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 DR1Q01658 176 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 NNTQ13423 1086 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 CUL1Q13616 776 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 TTC30AQ86WT1 665 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 ADGRF2Q8IZF7 708 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 IFT81Q8WYA0 676 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.92□□□□□ -0.343e-6■■■■■ 50.8
CACNA1D-228ENST00000638120 LPPQ93052 612 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 MAGOHBQ96A72 148 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 RUNDC3BQ96NL0 473 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 DNAI2Q9GZS0 605 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 SNX25Q9H3E2 840 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 PCYOX1Q9UHG3 505 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 NFU1Q9UMS0 254 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 A0A0U1RQF3 1178 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 A0A1W2PQ45 241 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 A0A1W2PQY0 241 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 ARL5CA6NH57 179 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 E5RJQ4 531 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 HCRTO43612 131 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 HUS1O60921 280 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 TCF4P15884 667 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 PSMA2P25787 234 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 GJC1P36383 396 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 FNTAP49354 379 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 AFF1P51825 1210 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 ZNF618Q5T7W0 954 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 STK32AQ8WU08 396 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 UBXN6Q9BZV1 441 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 RAB17Q9H0T7 212 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 SAGE1Q9NXZ1 904 aa12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-228ENST00000638120 CKBP12277 381 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 LMO2P25791 158 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 ECHS1P30084 290 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 PTGIRP43119 386 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 SCNN1GP51170 649 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 TRADDQ15628 312 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 TTC27Q6P3X3 843 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM183BPQ6ZVS7 135 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 JAMLQ86YT9 394 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 CCDC50Q8IVM0 306 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 TNIP3Q96KP6 325 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 GDAP1L1Q96MZ0 367 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 TRIM51Q9BSJ1 452 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 SLC4A5Q9BY07 1137 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 LRRC19Q9H756 370 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 MIOSQ9NXC5 875 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 HPCAL4Q9UM19 191 aa12.91□□□□□ -0.34
CACNA1D-228ENST00000638120 TULP2O00295 520 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CYB561D2O14569 222 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PDGFRBP09619 1106 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 RALAP11233 206 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 SKIP12755 728 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 COILP38432 576 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 BCAT1P54687 386 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ACAP1Q15027 740 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CCDC137Q6PK04 289 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 RCOR2Q8IZ40 523 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 EMC1Q8N766 993 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ADAM2Q99965 735 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 OSBPL8Q9BZF1 889 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 TRPV6Q9H1D0 765 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 STARD7Q9NQZ5 370 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 FAM114A2Q9NRY5 505 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms