RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CNGA2Q16280 664 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 KCNT1Q5JUK3 1230 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 FAM107BQ9H098 131 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 FAM49AQ9H0Q0 323 aaPredicted RBP22.66■■□□□ 1.22
CLN6-224ENST00000638076 C3orf70A6NLC5 250 aaPredicted RBP22.65■■□□□ 1.22
CLN6-224ENST00000638076 ECM2O94769 699 aaPredicted RBP22.65■■□□□ 1.22
CLN6-224ENST00000638076 FAM107AO95990 144 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 HMGCRP04035 888 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 INCA1Q0VD86 236 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 KYNUQ16719 465 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 LONRF1Q17RB8 773 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 SPRYD7Q5W111 196 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 NT5DC4Q86YG4 428 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 UBA3Q8TBC4 463 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 GMNCA6NCL1 334 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 TULP2O00295 520 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 NPTXRO95502 500 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 MMP13P45452 471 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 GABRB2P47870 512 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 HADHQ16836 314 aaKnown RBP22.65■■□□□ 1.22
CLN6-224ENST00000638076 HIBCHQ6NVY1 386 aaPredicted RBP22.65■■□□□ 1.22
CLN6-224ENST00000638076 ALLCQ8N6M5 410 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 PPP1R13LQ8WUF5 828 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 SELENOSQ9BQE4 189 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 CXCL16Q9H2A7 254 aa22.65■■□□□ 1.22
CLN6-224ENST00000638076 STAU1O95793 577 aaKnown RBP22.64■■□□□ 1.22
CLN6-224ENST00000638076 KRT7P08729 469 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 ZSCAN5DPP0CG00 497 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 DCAF4L1Q3SXM0 396 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 TNFAIP8L3Q5GJ75 292 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 CCHCR1Q8TD31 782 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 MCRS1Q96EZ8 462 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 ADAMTS10Q9H324 1103 aa22.64■■□□□ 1.22
CLN6-224ENST00000638076 DRG1Q9Y295 367 aaKnown RBP22.64■■□□□ 1.22
CLN6-224ENST00000638076 DYNC1LI2O43237 492 aaPredicted RBP22.64■■□□□ 1.21
CLN6-224ENST00000638076 ETS1P14921 441 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 HOXA11P31270 313 aaPredicted RBP22.64■■□□□ 1.21
CLN6-224ENST00000638076 FKBP1BP68106 108 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 OASLQ15646 514 aaKnown RBP22.64■■□□□ 1.21
CLN6-224ENST00000638076 MFSD5Q6N075 450 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 B4GALNT4Q76KP1 1039 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 STMN4Q9H169 189 aaPredicted RBP22.64■■□□□ 1.21
CLN6-224ENST00000638076 SNTG2Q9NY99 539 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 NINJ2Q9NZG7 142 aa22.64■■□□□ 1.21
CLN6-224ENST00000638076 KAT6AQ92794 2004 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 RRN3P2A6NIE6 340 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 CHN1P15882 459 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 ARSEP51690 589 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 VCPP55072 806 aaKnown RBP22.63■■□□□ 1.21
CLN6-224ENST00000638076 PRAMEF19Q5SWL8 479 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 ADAM7Q9H2U9 754 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 FAM169AQ9Y6X4 670 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 CYP3A5P20815 502 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 DYNLT1P63172 113 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 PLCB3Q01970 1234 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 FAM102AQ5T9C2 384 aaPredicted RBP22.63■■□□□ 1.21
CLN6-224ENST00000638076 CATSPER4Q7RTX7 472 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 NT5C1AQ9BXI3 368 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 GCOM2Q9BZD3 368 aaPredicted RBP22.63■■□□□ 1.21
CLN6-224ENST00000638076 CDHR5Q9HBB8 845 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 PCSK1NQ9UHG2 260 aa22.63■■□□□ 1.21
CLN6-224ENST00000638076 DNALI1O14645 258 aaPredicted RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 PSMC4P43686 418 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 MYO1EQ12965 1108 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 C2orf69Q8N8R5 385 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 TMEM121Q9BTD3 319 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 TSPAN16Q9UKR8 245 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 CITO14578 2027 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 SLC15A5A6NIM6 579 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 PIK3R2O00459 728 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 TRIM66O15016 1216 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 GPR32O75388 356 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 SMIM10L2AP0DMW4 78 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 SMIM10L2BP0DMW5 78 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 KDELR1P24390 212 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 CORO7P57737 925 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 CCDC38Q502W7 563 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 SLC27A1Q6PCB7 646 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 TTC39CQ8N584 583 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 C12orf29Q8N999 325 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 IPO4Q8TEX9 1081 aaKnown RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 NKD2Q969F2 451 aaPredicted RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 CENPTQ96BT3 561 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 ZMAT2Q96NC0 199 aaKnown RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 SERPINB12Q96P63 405 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 OSMRQ99650 979 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 EIF2AQ9BY44 585 aaKnown RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 SAE1Q9UBE0 346 aaPredicted RBP22.62■■□□□ 1.21
CLN6-224ENST00000638076 EFR3BQ9Y2G0 817 aa22.62■■□□□ 1.21
CLN6-224ENST00000638076 ITGAVP06756 1048 aa22.61■■□□□ 1.21
CLN6-224ENST00000638076 GPS1Q13098 491 aa22.61■■□□□ 1.21
CLN6-224ENST00000638076 ERMARDQ5T6L9 678 aa22.61■■□□□ 1.21
CLN6-224ENST00000638076 LCLAT1Q6UWP7 414 aa22.61■■□□□ 1.21
CLN6-224ENST00000638076 ZCCHC9Q8N567 271 aaKnown RBP22.61■■□□□ 1.21
CLN6-224ENST00000638076 XPO6Q96QU8 1125 aaKnown RBP22.61■■□□□ 1.21
CLN6-224ENST00000638076 PLEKHA5Q9HAU0 1116 aa22.61■■□□□ 1.21
CLN6-224ENST00000638076 PPEF2O14830 753 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 CST8O60676 142 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 RNF8O76064 485 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms