RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 DSEQ9UL01 958 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 EXOC7Q9UPT5 735 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ASB3Q9Y575 518 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 SNX9Q9Y5X1 595 aa8.42□□□□□ -1.06
PNKP-229ENST00000637897 ZNF233A6NK53 670 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 LILRB5O75023 590 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 NOL4O94818 638 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 CAVIN2O95810 425 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 LDHAP00338 332 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 CHRM1P11229 460 aaPredicted RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 PFKFB1P16118 471 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 TGM1P22735 817 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 CCNE1P24864 410 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 ALDH1A3P47895 512 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 PSMC1P62191 440 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 DLG4P78352 724 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 CLDN10P78369 228 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 RBP5P82980 135 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 PFKPQ01813 784 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 DMWDQ09019 674 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 PSMD6Q15008 389 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 SNRNP35Q16560 246 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 KMT5BQ4FZB7 885 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 TXNDC8Q6A555 127 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 TRIM68Q6AZZ1 485 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 Q6ZS52 159 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 PAQR9Q6ZVX9 377 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 C12orf56Q8IXR9 622 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 ADGRF2Q8IZF7 708 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 ADSSL1Q8N142 457 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 DCLK2Q8N568 766 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 TOP6BLQ8N6T0 577 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 FSIP1Q8NA03 581 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 ZBTB44Q8NCP5 570 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 SPPL2BQ8TCT7 592 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 DEPDC1BQ8WUY9 529 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 EZH1Q92800 747 aaPredicted RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 MYRFLQ96LU7 910 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 PPP1R9BQ96SB3 815 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 FAM83CQ9BQN1 747 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 FUCA2Q9BTY2 467 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 IRF2BPLQ9H1B7 796 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 DPEP3Q9H4B8 488 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 TASP1Q9H6P5 420 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 BRD9Q9H8M2 597 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 FBRSL1Q9HCM7 1045 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 POLR3BQ9NW08 1133 aaPredicted RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 GCNT4Q9P109 453 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 NDRG2Q9UN36 371 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 PIAS3Q9Y6X2 628 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 SDK1Q7Z5N4 2213 aa8.41□□□□□ -1.06
PNKP-229ENST00000637897 ZNF638Q14966 1978 aaKnown RBP8.41□□□□□ -1.06
PNKP-229ENST00000637897 PVALEFA0A1B0GWK0 134 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 SLC38A8A6NNN8 435 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 LRRIQ3A6PVS8 624 aaPredicted RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 CHADO15335 359 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 C4BPAP04003 597 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 KRT19P08727 400 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 WARSP23381 471 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 CMA1P23946 247 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 PNPLA4P41247 253 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 RPS9P46781 194 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 TUFMP49411 452 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 PGFP49763 221 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 CYP2J2P51589 502 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 NDUFA8P51970 172 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 MYL6P60660 151 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 SATB1Q01826 763 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 KNOP1Q1ED39 458 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 GAB4Q2WGN9 574 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 TDRD10Q5VZ19 366 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 SASS6Q6UVJ0 657 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 ZNF852Q6ZMS4 543 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 WDR49Q8IV35 697 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 CMTM8Q8IZV2 173 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 THEM5Q8N1Q8 247 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 ELMOD1Q8N336 334 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 PARD3BQ8TEW8 1205 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 NOC3LQ8WTT2 800 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 C2orf15Q8WU43 125 aaKnown RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 TMEM174Q8WUU8 243 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 FAM3CQ92520 227 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 NKD2Q969F2 451 aaPredicted RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 MYLPFQ96A32 169 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 TRIM44Q96DX7 344 aaPredicted RBP8.4□□□□□ -1.06
PNKP-229ENST00000637897 PCED1BQ96HM7 432 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 HPDLQ96IR7 371 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 SHDQ96IW2 340 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 ZNF560Q96MR9 790 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 CYP2S1Q96SQ9 504 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 CGRRF1Q99675 332 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 PCDHB5Q9Y5E4 795 aa8.4□□□□□ -1.06
PNKP-229ENST00000637897 UBE4BO95155 1302 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 C2orf78A6NCI8 922 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 SPECC1L-ADORA2AF8WAN1 911 aa8.39□□□□□ -1.07
PNKP-229ENST00000637897 K7ESF4 209 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms