RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SPATA2LQ8IUW3 424 aaPredicted RBP21.53■■□□□ 1.04
CLN6-222ENST00000637667 MAB21L3Q8N8X9 362 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 RDH13Q8NBN7 331 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 KBTBD7Q8WVZ9 684 aa21.53■■□□□ 1.04
CLN6-222ENST00000637667 MRPS31Q92665 395 aaKnown RBP21.53■■□□□ 1.04
CLN6-222ENST00000637667 SOBPA7XYQ1 873 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 CLIC2O15247 247 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 LILRB5O75023 590 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 NOL4O94818 638 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 DLATP10515 647 aaKnown RBP21.52■■□□□ 1.04
CLN6-222ENST00000637667 TDGF1P13385 188 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 AFMP43652 599 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 CCR3P51677 355 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 TNK2Q07912 1038 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 PSMD6Q15008 389 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 TXNDC8Q6A555 127 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 FAM171BQ6P995 826 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 TRAPPC11Q7Z392 1133 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 MON1AQ86VX9 555 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 FUBP3Q96I24 572 aaKnown RBP eCLIP21.52■■□□□ 1.04
CLN6-222ENST00000637667 SYT15Q9BQS2 421 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 UXTQ9UBK9 157 aaPredicted RBP21.52■■□□□ 1.04
CLN6-222ENST00000637667 CFAP45Q9UL16 551 aa21.52■■□□□ 1.04
CLN6-222ENST00000637667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 PVALEFA0A1B0GWK0 134 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 DNM1Q05193 864 aaKnown RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 CYP24A1Q07973 514 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 CUL4BQ13620 913 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 GAS6Q14393 721 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 PPP2R5DQ14738 602 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 BMT2Q1RMZ1 405 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 DCLK2Q8N568 766 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 XXYLT1Q8NBI6 393 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 USP13Q92995 863 aaPredicted RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 CCDC127Q96BQ5 260 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 TRMT2BQ96GJ1 504 aaKnown RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 MYRFLQ96LU7 910 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 FNBP1Q96RU3 617 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 CGRRF1Q99675 332 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 SLC39A2Q9NP94 309 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 GKN1Q9NS71 199 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 RBM12Q9NTZ6 932 aaKnown RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 RCOR1Q9UKL0 485 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 CDH9Q9ULB4 789 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 CCL26Q9Y258 94 aa21.51■■□□□ 1.03
CLN6-222ENST00000637667 NUP210Q8TEM1 1887 aaPredicted RBP21.51■■□□□ 1.03
CLN6-222ENST00000637667 CACNA1AO00555 2505 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 ATP2C2O75185 946 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 TADA3O75528 432 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 TNNI1P19237 187 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 WARSP23381 471 aaKnown RBP21.5■■□□□ 1.03
CLN6-222ENST00000637667 LMO2P25791 158 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 MAGEA11P43364 429 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 PSMC1P62191 440 aaKnown RBP21.5■■□□□ 1.03
CLN6-222ENST00000637667 ITPRIPL2Q3MIP1 535 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 WDR44Q5JSH3 913 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 DGKKQ5KSL6 1271 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 C4orf50Q6ZRC1 276 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 SCN4BQ8IWT1 228 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 GRAMD1CQ8IYS0 662 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 KIAA2013Q8IYS2 634 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 CEP57L1Q8IYX8 460 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 SPEM1Q8N4L4 309 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 MMS19Q96T76 1030 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 FAM83CQ9BQN1 747 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 EPC1Q9H2F5 836 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 KIF9Q9HAQ2 790 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 TDP1Q9NUW8 608 aa21.5■■□□□ 1.03
CLN6-222ENST00000637667 CGNQ9P2M7 1197 aaKnown RBP21.5■■□□□ 1.03
CLN6-222ENST00000637667 SMG5Q9UPR3 1016 aaKnown RBP21.5■■□□□ 1.03
CLN6-222ENST00000637667 FRYLO94915 3013 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 PDGFRBP09619 1106 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 ID4P47928 161 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 CXCL12P48061 93 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 NRLP54845 237 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 SATB1Q01826 763 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 PON2Q15165 354 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 MAPRE1Q15691 268 aaKnown RBP21.49■■□□□ 1.03
CLN6-222ENST00000637667 C12orf56Q8IXR9 622 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 MYLPFQ96A32 169 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 CRTAC1Q9NQ79 661 aa21.49■■□□□ 1.03
CLN6-222ENST00000637667 CST3P01034 146 aaPredicted RBP21.48■■□□□ 1.03
CLN6-222ENST00000637667 SLFN14P0C7P3 912 aa21.48■■□□□ 1.03
CLN6-222ENST00000637667 ZNF268Q14587 947 aaPredicted RBP21.48■■□□□ 1.03
CLN6-222ENST00000637667 KNOP1Q1ED39 458 aaKnown RBP21.48■■□□□ 1.03
CLN6-222ENST00000637667 Q6ZS52 159 aa21.48■■□□□ 1.03
CLN6-222ENST00000637667 HPS4Q9NQG7 708 aa21.48■■□□□ 1.03
CLN6-222ENST00000637667 NCDNQ9UBB6 729 aa21.48■■□□□ 1.03
CLN6-222ENST00000637667 MAGEC2Q9UBF1 373 aaPredicted RBP21.48■■□□□ 1.03
CLN6-222ENST00000637667 SERTAD1Q9UHV2 236 aa21.48■■□□□ 1.03
CLN6-222ENST00000637667 CCINQ13939 588 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 VSTM1Q6UX27 236 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 RIN3Q8TB24 985 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 GOLGA5Q8TBA6 731 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 MRPL45Q9BRJ2 306 aaKnown RBP21.47■■□□□ 1.03
CLN6-222ENST00000637667 GZF1Q9H116 711 aaPredicted RBP21.47■■□□□ 1.03
CLN6-222ENST00000637667 SNX25Q9H3E2 840 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 EBF3Q9H4W6 596 aa21.47■■□□□ 1.03
CLN6-222ENST00000637667 TRPC7Q9HCX4 862 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms